Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0687 ATGGCTAGCAACAATTCATCAAATGGGTTGCCTCCGTCTAGTTCCGGTGATGCTTCGCCTCCTCCGACGCCACCTTCTCCGCCGGATGATTCAGAGCCTCCCCAAAGTTCGCCACCAAAGTCTCCTCCGCCGTCGCAACCACCGCCGCCACCGCCGAAGTCTTCTCCACCACCGTCTCCATCTCAATCTCCACCGCCACCTTCCTCGTCTCCGCCACCGGAATCATCGCCGCCGCCGCAGCAGTCTCCACCTCCTCCGCCGAAATCTTCACCACCGCCAACTCCTATAAATTCACCACCTCCTAAGAACTCACCACCACCTAAGAACTCACCATCCCCAACAACTTCACCTCCTCGTCCCTCTTCCTCACCCCCAACACCACCACCATCATCAACACCGCCACTACCCTCCACACCTTCAACACCACCATCACCATCCCACACTGCTTCTCCATCTCCTAGCCCGTCTCAGCAGTCATCTCCACCACAACCTCTAACCCCTCCTCCTCCTAGTAACACATCTCCTCCAACTCCAACTCCTACTCCTACTCCAACTCTAACTCCACCAGCACCTGCTCCAAATGTTACTCCGGCTACGGCGCCACCACCTGGTTCAGTAATTAACCCTCCATCCGTTTCCCCTTCTGGCTCCCTTTCAAAACCAAGTGATACTCCTTCTAGTAGCCCCTCCCCATCATCTTCGCGTGGTGCCAGTCACAATAATACAGGAAAAATTGTTGGCCTTACCCTTGGCGGGGTTGCAGTGCTTGCCGTTGTTGCTCTACTTCTCCTTTTATTATTCAGGCGCAACAAAAAACGTGGGAATCATTATGCTCTTCCACCCCCTAATAAATTTAATCATATGAACGGAGGTGCAGATGTACGTTACTATGTAGAGGAGCACGGTGTTGGGAATGGTTCACAGGATAAGTTTTATAGTACACAGCTTGCTTCTCCTGGAACCAACTATTCAGACCCAGCATCACAGCCCATGGGTCAGATTCTTTTTAGTTATGACAAGGTTTTGGAAATAACTGATGGATTTTCCAGTAAGAACGTGATAGGGGAAGGAGGATTTGGGTGTGTTTACAAGGCTTTCATGCCAGATGGTAGAACTGGGGCAGTTAAAGTACTGAAGGCTGGTGGTGGGCAGGGAGAAAGGGAGTTCAGGGCTGAGGTGGATATTATCAGCCGTATTCATCATCGACATTTGGTATCATTAATTGGTTATTGCATATCCGAGCAGCAAAGAGTGCTTATCTATGAATTCGTTCCTAATGGCAATCTCAGTCACCACATGCATGGAAGTGGTGTGCCAGTTTTGAGTTGGGAAAAGAGGATGAAGATAGCATTTGGTGCAGCAAAGGGCTTGGCATATCTGCATGAGGGCTGCAACCCAAAGATTATCCACAGAGACATCAAGTCACCAAACATACTATTGGATGATGCTTTTGAGGCACAGGTTGCAGACTTTGGACTTGCCAGACTAACCGATGATGCTAATACTCATGTATCAACTAGGGTGATGGGAACCTTCGGGTACATGGCTCCCGAATATGCAACTAGTGGAAAATTAACAGATAGATCAGATGTTTTCTCTTACGGAGTTGTCCTCCTTGAGCTTATAACTGGAAGGAAACCTGTAGATCCAACGCAACCTGTGGGAGAAGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCCTTCGTGCAATCGAGACAGGTGACTTTAGTGAACTTGTGGACCCAAGGCTTGAAGGGAATTATGCCGACAGTGAAATGTCCAAAATGATTGAGGCAACGGCTGCATGTGTTCGCCATTCTGCTCCAAAACGGCCTCGTATGGTTCAGGTGGCAAGAGCCTTAGATACCAGAGATCAATATGATCTATCTAATGGCGTAAAATACGGTCAGAGTACTGTTTATGACTCCAGCCAATACAACGAAGATCTAATGAGATTCAAAAGAATGGCCAATGGCAGTTTTGGTGATTCTGAACTGGATATGTGTAGTACAGATTACAGTTCAAAAGATATGTCTGGGCCCCAATACAAGTGGAGCCAAAGGACTTCAAGTAGTGGTTCAGAAGCCAAAGCTTACTACAGCCTTAGTAACAGTGCTGCTGAGAACAGGTCTTGA 2136 0.4846 MASNNSSNGLPPSSSGDASPPPTPPSPPDDSEPPQSSPPKSPPPSQPPPPPPKSSPPPSPSQSPPPPSSSPPPESSPPPQQSPPPPPKSSPPPTPINSPPPKNSPPPKNSPSPTTSPPRPSSSPPTPPPSSTPPLPSTPSTPPSPSHTASPSPSPSQQSSPPQPLTPPPPSNTSPPTPTPTPTPTLTPPAPAPNVTPATAPPPGSVINPPSVSPSGSLSKPSDTPSSSPSPSSSRGASHNNTGKIVGLTLGGVAVLAVVALLLLLLFRRNKKRGNHYALPPPNKFNHMNGGADVRYYVEEHGVGNGSQDKFYSTQLASPGTNYSDPASQPMGQILFSYDKVLEITDGFSSKNVIGEGGFGCVYKAFMPDGRTGAVKVLKAGGGQGEREFRAEVDIISRIHHRHLVSLIGYCISEQQRVLIYEFVPNGNLSHHMHGSGVPVLSWEKRMKIAFGAAKGLAYLHEGCNPKIIHRDIKSPNILLDDAFEAQVADFGLARLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSYGVVLLELITGRKPVDPTQPVGEESLVEWARPLLLRAIETGDFSELVDPRLEGNYADSEMSKMIEATAACVRHSAPKRPRMVQVARALDTRDQYDLSNGVKYGQSTVYDSSQYNEDLMRFKRMANGSFGDSELDMCSTDYSSKDMSGPQYKWSQRTSSSGSEAKAYYSLSNSAAENRS* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0687 711 Gene3D Transferase(Phosphotransferase) domain 1 424 639 - -
Lan18g0687 711 Gene3D Phosphorylase Kinase; domain 1 308 423 - -
Lan18g0687 711 SMART serkin_6 348 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0687 711 MobiDBLite consensus disorder prediction 671 711 - -
Lan18g0687 711 ProSiteProfiles Protein kinase domain profile. 348 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0687 711 MobiDBLite consensus disorder prediction 15 209 - -
Lan18g0687 711 PANTHER RECEPTOR-LIKE KINASE 69 690 - -
Lan18g0687 711 MobiDBLite consensus disorder prediction 210 239 - -
Lan18g0687 711 MobiDBLite consensus disorder prediction 1 239 - -
Lan18g0687 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Lan18g0687 711 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 69 690 - -
Lan18g0687 711 SUPERFAMILY Protein kinase-like (PK-like) 321 621 IPR011009 -
Lan18g0687 711 Pfam Protein tyrosine and serine/threonine kinase 351 620 IPR001245 GO:0004672|GO:0006468
Lan18g0687 711 CDD STKc_IRAK 354 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0687 Lan-Chr18 12127870 12135187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0687 335 617 Trihelix Transcription Factor Family AT1G68690 68.198 2.23e-145 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lan18g0687 PK_Tyr_Ser-Thr 4.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0687 - - lja:Lj2g3v1414850.1 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0687 18 12127870 12135187 Lan6g0588 6 5160895 5170687 LSH