Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0683 ATGAACAAACAACAACATAGCCATGTGAGACTTTTCTGTCTCATTACCCTCTTCTCATCATCTTTCAGTATCGGTTTTGCCACGGTGGCCGGAGAAGCCAAAAACCCTTTTACTCCAAAGGCTTATCTGATTCGTTACTGGGACAAAGAGATCCGTAACAACCTTCCCAAACCATCGTTCCTTTTTTCCAAAGCCTCAACGCTGAATGCCGTTGATGCGGCGGCGTTTGCTAAACTCGCCGCCGTAGACGGCGGTGCTGCACTCTCCACGCGCCTCCCTGAGTTCTGCGCCGCAGCGAAACTCCTCTGTTTCCCTGATTTGCGACCGAGTTTGGAAAAGCATGACAAAGACTCAAACTTTGTAAGTTACCAAGATAAGAACTTCACCAATTACGGAACGAGTCGACCCGGTGGGCTTGACTCGTTCAAGAACTACTCAGATGGATCGAATATCCCGGTGAACGATTTCCGCCGCTACAGCCGAAACTCCGCCGGCCATAACGATAGTTTCACCAGCTACGCAGGCGGTGGAAACGTCGCTGAACAAACCTTCCACACCTACGGCACCGGAGGCACCGGAGGCGCTGGTGACTTCAAAGTTTACTCCGATCATTCCAATGTCCCTGATCTCCGATTCACAGCCTACTCCTCCGACGCAAACGGAAGAACCCAATCCTTCACCGCATACTCCGAAGACGGCAATTCCGGTGAACAATCATTCTCATCGTACGGCAAAAACGGTAACGGCCCTGAGAACAAGTTTTCATCGTACGGAAAAGGCTCCAACGTTGTTGGTTCTGGTTTTTCCAATTATGCTGAAACCGCAAATGGCGCCAATGACAGTTTCACAAGTTATGGTTTTGACATGAACAACCCCACTATCAATTTCAATAACTATGCTGATGATGGAAACGGTGTTACTGAAACTTTCACTAGTTATCGTGATCAATCTAATGTTGGTGCTGATTCATTCACTTCTTATGCTAAAAATTCCAATGCTGCTGAAATTGGTTTTAGCAACTATGGCCAATCATTCAATGAAGGAACAGACAAATTCACAGGTTATGGAAAAGGTGCTACTGGTGAAAGTAAAGTTGGGTTTACAACATATGGGGTGAATAACACGTTTAAGGAGTATAACAAGGAAGATGTTTCTGTCTCGTTTTCGAGGTATACTAAATCGAGTTCAAGTGGTTCAGTGAGTCAACGTGCTGCATCAGTGAGTGGCAGTTTGGTAAATAAGTGGGTTGAGCCAGGCAAATTCTTTAGGGAGAAGATGATGAAGGAAGGGACTGTGATGCCTTTGCCTGATATTAGAGATAAAATGCCGCAAAGGTCGTTTTTGCCCCGGAGTATTTTGTCGAAATTACCCTTTTCGTCATCGAAGATATCTGAGTTGAAGAAGATTTTCAAGGCTTATGATAATAGTTCAATGGAAAAGATGATGAAGGACTCTTTGGGTGAGTGTGAGAGGGTACCGAGTCCTGGTGAGACAAAACGGTGTGTTGGGTCAATGGAGGATATGATCGACTTTGCGACTTCGGTTTTGGGTCGAAATGTGGTAGCTCGAACAACCGAGAATGTAAATGGGTCAAAGAAGAATGTGATGGTGAGTAATGTTAAGGGGATCAATGGTGGTAAAGTCACACAATCTGTTTCTTGTCACCAAAGTTTGTTTCCTTATTTGCTCTATTATTGCCATTCTGTGCCTAAGGTTCGGGTTTATGAAGCGGATCTACTTGACCCGAGTACCAAATCCAAGATTAACCATGGTGTTGCTATATGTCACTTGGATACCTCTATTTGGAGCCCCACCCATGGTGCATTTCTCGCTCTAGGGTCGGGTCCAGGTCAAATTGAAGTGTGCCATTGGATCTTTGAGAATGACTTGACTTGGACAATTGCTGATTGA 1911 0.4526 MNKQQHSHVRLFCLITLFSSSFSIGFATVAGEAKNPFTPKAYLIRYWDKEIRNNLPKPSFLFSKASTLNAVDAAAFAKLAAVDGGAALSTRLPEFCAAAKLLCFPDLRPSLEKHDKDSNFVSYQDKNFTNYGTSRPGGLDSFKNYSDGSNIPVNDFRRYSRNSAGHNDSFTSYAGGGNVAEQTFHTYGTGGTGGAGDFKVYSDHSNVPDLRFTAYSSDANGRTQSFTAYSEDGNSGEQSFSSYGKNGNGPENKFSSYGKGSNVVGSGFSNYAETANGANDSFTSYGFDMNNPTINFNNYADDGNGVTETFTSYRDQSNVGADSFTSYAKNSNAAEIGFSNYGQSFNEGTDKFTGYGKGATGESKVGFTTYGVNNTFKEYNKEDVSVSFSRYTKSSSSGSVSQRAASVSGSLVNKWVEPGKFFREKMMKEGTVMPLPDIRDKMPQRSFLPRSILSKLPFSSSKISELKKIFKAYDNSSMEKMMKDSLGECERVPSPGETKRCVGSMEDMIDFATSVLGRNVVARTTENVNGSKKNVMVSNVKGINGGKVTQSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPSTKSKINHGVAICHLDTSIWSPTHGAFLALGSGPGQIEVCHWIFENDLTWTIAD* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0683 636 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 14 636 - -
Lan18g0683 636 MobiDBLite consensus disorder prediction 227 252 - -
Lan18g0683 636 ProSiteProfiles BURP domain profile. 421 635 IPR004873 -
Lan18g0683 636 SMART BURP_2 419 635 IPR004873 -
Lan18g0683 636 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 14 636 - -
Lan18g0683 636 Pfam BURP domain 421 633 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0683 Lan-Chr18 12084946 12087523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0683 - - gmx:100797939 944.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0683 18 12084946 12087523 Lan6g0592 6 5194304 5197317 LSH
Lan18g0683 18 12084946 12087523 Lan18g0534 18 10170720 10171511 PCT
Lan18g0534 18 10170720 10171511 Lan18g0683 18 12084946 12087523 PCT