Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0682 ATGGCTTCTTCATTAAGGATTTCAAAGTTGCTATCTCGTTCTTTTCTTTCTGCTTCAACCACTTCTTTGTCTTCTAGAGGTTCCAGTGGTTGCATTGGTACAGGGCTCAGTAAATATAGCACTGAAGCTGCTATTGAAGAACCAATTAAACCATCGGTTCAGATAGAACATAATCAGCTCTTAATCAATGGACAATTTGTTGATTCTGTTTCTGGCAAAACATTTCCGACGATGGATCCTAGGACAGGGGAAGTGATTTCTCATGTGGCGGAGGGTGACCGTGAAGATGTCAATCTAGCCGTTGCAGCTGCGCGCAAAGCATTTGATCAGGGCCCTTGGACTAGGATGACAGCATATGAAAGACAAAGGATATTGCTGCGCGCCGCTGATCTGTTAGAAAAGCACAATGATGAGCTTGCTGCACTTGAGAGTTGGGATAGTGGGAAGCCATATGAGCAATCTTCTAAAGTTGAAGTTCCAATGCTGGTTCACCTATTTCGATACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGACCATATCATGTACAAACACTGCATGAGCCTATTGGTGTTGCTGGTCAAATCATTCCATGGAACTTCCCACTTTTGATGTTTGGCTGGAAGGTTGGGCCAGCATTGGCCTGTGGCAACACTATTGTTTTGAAAACAGCTGAGCAGACACCATTATCTGCTTTATATGCATCTAAGTTACTTCATGAGGCTGGTCTTCCACCTGGTGTTTTAAATATAGTATCTGGCTTTGGTCCAACTGCTGGTGCTGCTATTGCTACACACATGGATGTGGATAAGATTGCTTTTACTGGTTCAACTGCTACTGGAAGAGTAGTCCTTGAACTGGCAGCAAGAAGCAACCTTAAGACTGTAACTTTGGAGCTTGGTGGCAAATCCCCTTTTATTGTATGTGAAGATGCCGATGTAGACCGGGCTGTTGAGCTTGCTCACTTTGCATTATTCTTCAATCAGGGGCAATGCTGCTGTGCTGGATCTCGAACATTTGTTCACGAAAGCGTGTATGACGAGTTTGTTGAGAAGTCTAGGGAACGTGCTTTGAAACGTGTTGTTGGTGATCCATTCAAGGCAGGAGTAGAGCAAGGTCCTCAGATTGATTCAGCACAATTTAAGAAAATACTCAAGTATATCAAATCCGGCGTTGAAAGTGGAGCTACCCTTGAAGCTGGAGGAGAAAGATTTGGAGACAAGGGCTTCTATGTTCAGCCTACTGTCTTCTCAAATGTTCAGGATGACATGCTGATTGCAAAGGAAGAGATTTTCGGCCCAGTGCAATCCATACTAAAATTCAAGGACCTTGATGATGTGATTAGAAGAGCAAACGACTCACCCTATGGTCTAGCTGCTGGGGTGTTCACAAAGAACATAGACACTGCCAACACTTTGACTCGCGCATTGAGAGCTGGGTCAGTATTTGTGAACTGCTATGATGTATTTGATGCAGGTGTTCCCTTTGGAGGATACAAAATGAGTGGGCATGGAAGAGAAAAAGGAGAATATGGTCTTAAGAATTACTTGCAAGTGAAGGCTGTTGTTACTCCTTTGATCAACCCAGCTTGGCTTTGA 1617 0.4391 MASSLRISKLLSRSFLSASTTSLSSRGSSGCIGTGLSKYSTEAAIEEPIKPSVQIEHNQLLINGQFVDSVSGKTFPTMDPRTGEVISHVAEGDREDVNLAVAAARKAFDQGPWTRMTAYERQRILLRAADLLEKHNDELAALESWDSGKPYEQSSKVEVPMLVHLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFGWKVGPALACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNIVSGFGPTAGAAIATHMDVDKIAFTGSTATGRVVLELAARSNLKTVTLELGGKSPFIVCEDADVDRAVELAHFALFFNQGQCCCAGSRTFVHESVYDEFVEKSRERALKRVVGDPFKAGVEQGPQIDSAQFKKILKYIKSGVESGATLEAGGERFGDKGFYVQPTVFSNVQDDMLIAKEEIFGPVQSILKFKDLDDVIRRANDSPYGLAAGVFTKNIDTANTLTRALRAGSVFVNCYDVFDAGVPFGGYKMSGHGREKGEYGLKNYLQVKAVVTPLINPAWL* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0682 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 332 343 IPR016160 GO:0016491
Lan18g0682 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 72 528 IPR016162 GO:0016491
Lan18g0682 538 CDD ALDH_F2BC 55 530 - -
Lan18g0682 538 Pfam Aldehyde dehydrogenase family 66 528 IPR015590 GO:0016491
Lan18g0682 538 SUPERFAMILY ALDH-like 53 533 IPR016161 GO:0016491
Lan18g0682 538 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 26 538 - -
Lan18g0682 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 499 IPR016163 GO:0016620
Lan18g0682 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 26 538 - -
Lan18g0682 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0682 Lan-Chr18 12062026 12066706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0682 6 538 Aldehyde Dehydrogenase Gene Family AT3G48000 75.281 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0682 K00128 - gmx:100786773 923.309