Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0680 ATGGGTAGTAGTGGGATTGAAGAGACTAGAGTGAGGTTGTTGGATAGTTGCAGCAATGATGGTAGCAGTGAATCAAGATGGGTTGATGGAAGTGAAGTGGATTCAATGGAAGCTCCTCCATCATGGTCTAATGAAGGTAGTAGAGAAGGATATGGTTCACTTAAGAGGAGACTTGTGAAGAAGCCCAAGAGGGTTGATTCATTTGATGTTGAAGCTATGGAGATTTCTAGAATTCAGGACCATCACTCCAAGGATGATTCCCTTTTGCCCACTCTTGCATTAGCATTTCAGACTCTTGGTGTGGTATACGGTGACATGGGAACAAGTCCTCTCTATGTTTTTGCTGATGTCTTCAGCAAGGTTCCAATTGAATCAGATGTTGATATCTTGGGGGCATTATCATTAGTGATGTATACAATAGCACTTATTCCATTAGCAAAGTATGTTTTTATAGTCCTCAAAGCAAATGACAATGGAGAAGGAGGAACATTTGCACTGTACTCGCTAATTTGCCGATATGCAAATGTGGGCCTACTTCCAAATCGACAACAGGCTGATGAATATATCTCTAGTTTTAGGCTCAAACTACCCACCTCAGAGCTGGAAAGGGCTTTAAAAATAAAGGACACTTTGGAAAAGAAGAAGTCTTTGAAAACCCTTTTGTTGCTGTTGGTTCTGCTGGGAACTTCCATGGTTATTGGAGATGGTATTCTAACCCCAGCAATGTCCGTGTTGTCTGCCATAAGTGGGCTTCAGGGTGAAATAGAAAGTTTTGGTACAGGGGAAGTGGTTATTATTTCAATCGTAGTACTGGTGGCATTGTTCAGCATACAACAGTTTGGTACCGGTAAAGTAGGTTTCATGTTTGCCCCTATACTTGCCTTATGGTTCTTTTCTCTGGGTTCTATTGGACTCTACAATATGGTTAAGTATGATATTACTGTTCTGAGAGCAGTAAATCCAGCTTATATTTATTATTTCTTTAAGAAGAATGGCAAACGTGCATGGTCAGCTCTTGGTGGTTGTGTTCTGTGTATTACAGGTGCAGAAGCAATGTTTGCTGATCTGGGTCATTTTTCTGTACGAGCAATACAGATTGCCTTCACCTGTGTGGTATTTCCTTGTCTCCTCCTTGCTTATATGGGTGAGGCTGCTTATTTGATGAAGAACCCGGCTTCTTATTCAAATATATTCTACGATTCTGTTCCGGCTAGTCTCTTCTGGCCAGTGTTTGTGATAGCCACACTTGCTGCTATGATCGCCAGCCAAGCTATGATATCTGCTACTTTTTCATGCATAAAGCAAGCTATGGCTTTGGGATGCTTTCCAAGGATCAAGATAATTCACACCTCAAGAAAGTTCATGGGTCAAATTTACATCCCTGTAATAAATTGGTTTCTGATGGTCATGTGCATAATTATCGTTGCCATCTTCCAACGCACTACTGATATTGCAAATGCATATGGCATTGCCGAAGTTGTTGTTATGATGGTTAGCACCATCTTGGTGACACTTGTAATGCTTTTAATTTGGAAGACCAGTTTGTTTTCGGCATTTTGTTTCTTCCTCATATTCGGATCAGTTGAGCTCATTTACATGTCTTCTGTACTGACAAAAATTGCTGAGGGTGGCTGGATCCCACTTGCCTTTGCTATCTTCTTCCTTTCTGTGATGTACACATGGAACTATGGGAGTGTCTTGAAATACCAAAGCGAAGTTAGGGAGAAGATCTCATTGGACGTAATGCTTGACCTTGGCTCCAATCTTGGGACAGTAAGAGTACCGGGAATAGGGCTGCTATATAACGAGCTTGTCCAGGGCATTCCCTCCATTTTCGTGCAGTTCCTGCTGAGCCTTCCAGCTCTTCACTCTACCATAATTTTTGTCTGCATTAAATATGTCCCGGTCCCGGTGGTTCCTCAAGAGGAAAGGTTTCTATTTCGAAGAGTTTGCCCAAAAGATTACCACATGTTCCGCTGCGTTGCCAGGTACGGTTACAAAGATGTAAGGAAGGAAGATCACCATGCATTTGAGCAACTTCTTATCCAAAGTCTTGATCAGTTCTTGAGAAGGGAGGCTCAAGAAACTGCCTTGGAGAGCAACTTGGTTGAAGACATTGACAGTGTCTCAATGATATCCAAGGATTCAGACCTTCCCGCTGATAGTGTAACCGAGGAGCTTAGGATTCCATTGATGCTCGGTCAAAATCCCAAAGAACCAGGAACTTCTACCTTTCAGGATCATGCACCAGCATTACCATCAAGTTATATGCCATCAGATGAAGATCCTAGTCTTGAATATGAGCTTTCAGCCCTTAGAGAAGCAACAGCATCAGGATGCACCTATTTGCTTGGACATGGGGATGTGAGGGCAAAAAAGAACTCTCTTTTCATTAAGAAATTGGTGATAAATTATTTCTATGCATTTCTCAGAAAAAACTGCAGAGGTGGTACTGCAAACATGAAAGTACCTCACACCAATATTATTCAAGTTGGCATGACATATATGGTGTGA 2514 0.4181 MGSSGIEETRVRLLDSCSNDGSSESRWVDGSEVDSMEAPPSWSNEGSREGYGSLKRRLVKKPKRVDSFDVEAMEISRIQDHHSKDDSLLPTLALAFQTLGVVYGDMGTSPLYVFADVFSKVPIESDVDILGALSLVMYTIALIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVGLLPNRQQADEYISSFRLKLPTSELERALKIKDTLEKKKSLKTLLLLLVLLGTSMVIGDGILTPAMSVLSAISGLQGEIESFGTGEVVIISIVVLVALFSIQQFGTGKVGFMFAPILALWFFSLGSIGLYNMVKYDITVLRAVNPAYIYYFFKKNGKRAWSALGGCVLCITGAEAMFADLGHFSVRAIQIAFTCVVFPCLLLAYMGEAAYLMKNPASYSNIFYDSVPASLFWPVFVIATLAAMIASQAMISATFSCIKQAMALGCFPRIKIIHTSRKFMGQIYIPVINWFLMVMCIIIVAIFQRTTDIANAYGIAEVVVMMVSTILVTLVMLLIWKTSLFSAFCFFLIFGSVELIYMSSVLTKIAEGGWIPLAFAIFFLSVMYTWNYGSVLKYQSEVREKISLDVMLDLGSNLGTVRVPGIGLLYNELVQGIPSIFVQFLLSLPALHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHHAFEQLLIQSLDQFLRREAQETALESNLVEDIDSVSMISKDSDLPADSVTEELRIPLMLGQNPKEPGTSTFQDHAPALPSSYMPSDEDPSLEYELSALREATASGCTYLLGHGDVRAKKNSLFIKKLVINYFYAFLRKNCRGGTANMKVPHTNIIQVGMTYMV* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0680 837 MobiDBLite consensus disorder prediction 15 49 - -
Lan18g0680 837 TIGRFAM kup: potassium uptake protein 94 837 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lan18g0680 837 PANTHER POTASSIUM TRANSPORTER 12-RELATED 22 837 - -
Lan18g0680 837 Pfam K+ potassium transporter 95 668 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lan18g0680 837 MobiDBLite consensus disorder prediction 15 29 - -
Lan18g0680 837 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 22 837 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0680 Lan-Chr18 12034561 12040779 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0680 21 837 Inorganic Solute Cotransporters AT1G60160 75.274 0.0 1238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0680 K03549 - gmx:100814419 1306.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0604 17 5070752 5076651 Lan18g0680 18 12034561 12040779 LSH
Lan18g0680 18 12034561 12040779 Lan6g0597 6 5231769 5237853 LSH