Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0669 ATGTCTTTATCCTTCCCCGATATCTTCTCCGACTCTAACCTCCTCTGCAGCGAGGACACCTCTGGAATCATCTCCGGAGAGTCGTCGGAATTATCCTCCTCCGACATAGATTTATCGCCGCCGACGCTGTCATCGTCGGAGGAGGAAGAGTCAATCGCCGGATTCATCGAAAACGAACGGAACTTCGTTCCTGGATTCGATTACCTTTCGAGGTTACAGTCTCCATCGCTCGACGCATCCGCCAGAAAAGAATCAGTTGAATGGATTCTGAAGGTGCAGGCTTATTACAGTTTGCAACCGCTGACGGCTTATCTCTCCGTCAATTACATGGATCGGTTCTTGAACTCTCGGCGGCACCTGCCGCAAACAAATGGGTGGCAACTGCAACTTCTGTCTGTTGCATGCTTGTCTTTAGCGGCAAAGATGGAGGAACCTATGGTTCCGTCTCTCTTGGATCTCCAGGTAGAAGGTCCCAAATATATATTTGAACCCAAAACAATTCGAAGGATGGAGCTGCTTGTTCTGGGTGTTTTGGATTGGAGGCTAAGATCAATCACCCCGTTTAGCTTCCTCGGATTCTTCTCATGCAAATTTGATTCAACCGGAATTTTTAATGGGTTCCTCATTTCACGGGCTACCCAAATAATCTTATCTAATGTTCAAGAGGCTAGTTTTCTTGCATACTGGCCATCATGCATTGCTGTGGCGGCCTTACTATGTGCTGCTAACGAAATTCCTAACTGGTCACTCGTTAAACCAGAACATGCCGAGTCATGGTGCGAGGGGTTAAGAAAAGAGAAAATTATTGGGTGTTACCAATTAATGCAAGAACTTGTTATTGACAATAACAAGAGGAAGTTCCCTAAAGTGTTACCACAGCTGCGAGTGGCAACTCAGTACCCAATGAGGTCAAGTGTCTCGTCATCTTCTTCCTCTTCTACTTCCTTCTCCTTGTCTTACAAAAGGAGGAGAATAAATAGACACTGCTTGTGGCTTGATGGTGACAAAGAAAACCAGTGA 1020 0.4598 MSLSFPDIFSDSNLLCSEDTSGIISGESSELSSSDIDLSPPTLSSSEEEESIAGFIENERNFVPGFDYLSRLQSPSLDASARKESVEWILKVQAYYSLQPLTAYLSVNYMDRFLNSRRHLPQTNGWQLQLLSVACLSLAAKMEEPMVPSLLDLQVEGPKYIFEPKTIRRMELLVLGVLDWRLRSITPFSFLGFFSCKFDSTGIFNGFLISRATQIILSNVQEASFLAYWPSCIAVAALLCAANEIPNWSLVKPEHAESWCEGLRKEKIIGCYQLMQELVIDNNKRKFPKVLPQLRVATQYPMRSSVSSSSSSSTSFSLSYKRRRINRHCLWLDGDKENQ* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0669 339 SMART cyclin_7 87 176 IPR013763 -
Lan18g0669 339 CDD CYCLIN 82 175 IPR013763 -
Lan18g0669 339 Gene3D - 65 183 - -
Lan18g0669 339 PANTHER CYCLINS 12 327 IPR039361 -
Lan18g0669 339 Gene3D - 56 246 - -
Lan18g0669 339 SUPERFAMILY Cyclin-like 40 182 IPR036915 -
Lan18g0669 339 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 12 327 - -
Lan18g0669 339 Pfam Cyclin, N-terminal domain 54 182 IPR006671 -
Lan18g0669 339 ProSitePatterns Cyclins signature. 82 113 IPR006671 -
Lan18g0669 339 SMART Cyclin_C_2 185 312 IPR004367 -
Lan18g0669 339 MobiDBLite consensus disorder prediction 26 45 - -
Lan18g0669 339 Pfam Cyclin, C-terminal domain 185 295 IPR004367 -
Lan18g0669 339 SUPERFAMILY Cyclin-like 167 289 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0669 Lan-Chr18 11858006 11862191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0669 1 299 Core Cell Cycle Gene Families AT1G70210 62.583 8.97e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0669 K18810 - gmx:100775224 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0613 17 5168071 5172920 Lan18g0669 18 11858006 11862191 LSH
Lan18g0669 18 11858006 11862191 Lan6g0614 6 5378233 5381867 LSH
Lan18g0669 18 11858006 11862191 Lan17g1095 17 17878665 17882720 PCT
Lan17g1095 17 17878665 17882720 Lan18g0669 18 11858006 11862191 PCT