LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan18g0665	ATGATGCTTCTCCTTCTGACCCTTCTCTTTGTTTTACATAATTTTGTAATACCAACCTGCCATTGTCAGACTCAGAACATTGAAACATTCTATCCAATACAAACTACAGAACCAGCACCAACATCACAACTACCTGAGCCACAAGCATCACCACCAACACCATTGCTCCTAGCCACAGGACCAGTGGCAGCATCTAAAAGTTCTTCATCAAACAGTAACATAGCAAAGGCTGTAGCTGCAACTGCAGCAAGTTCTGTTGTTATTTCTGGTTTACTATTCCTTTTAGTTCAAAGGTGCTTTAGAGCAAGGAGGAGAAAGGAGAGAATCAGCACTGCTTCTGTTGGAGATAGGAGTGTAGCCCCTCAGATAAATATGTTTGAGAAAAGTGGTAGAAACATTAAGGGACTAGTTGTTGATGAGAATGGTTTGGATGTGATTTATTGGAGAAAGCTTCAAGAGCATAAGAATTCAAAGAAGGTTTTGAGTAGTGCCAAAAACAAACAAGAAGATTGTCATGAAGGAAATCAAGGGTCTATTCAAGAAACTCCTCTGCTTAGAGGGAAATCATCAACTTCACACATGAATATATTTCCTGAAAAACCATATACAATCATGAGAATTCTACCTCCTGCTCCACCTCCCATTGTTTCTCTATCAGTTGAAGATGCTATTAATGTTGTTCACAAACCAAATTATCCTACTTCACCATTTGCGCCATCCCCTCCTCCTTTACCACAAAGACCACCCTCACTACCTGCACCACCACAGCCAGATAGAAAGAGTTTAGCACCAACACTTCCTGTTCCACCTCCTCCACCAATTCTAGGAAGAAAAGGCCAGGCATCACCATCAACCCCGGCTAGAAAGAGTCAAACACCGCCGCCGCCGCCTCCACCAAAGGCAGTTATCTCAAAGTCATCATCAAAACCACCACCTATCCCTATTGGAATGCCAGTTAGCACCAGTAAGAGAGGAAACTCTTCAGGTGAAGATATGTCAGAAACTGGCAATGGTCAAGTAAAATTGAAGCCTTTGCATTGGGATAAGGTGAATACAAATCTTGATCATTCTATGGTGTGGGACAAAATGAAGGGATCTTTCAGGGTTGATGGTGATCTTATGGAAGCTCTCTTCGGGAACATTGCCACCAACCGAAGTACCTCGAAGGGAAATGACTCAACAAGTCCAACCAGGGATGCCAAAGCTCCATCAACAAAAGCTTTCCTTCTTGACCAAAGAAGATCGCAGAACATTGCCATTGTTTTGAAATCTATGGCAGTTTCACAAAAAGAAATTATCGATGCACTCGTCGAAGGTCAAGGCCTCAATACGGAGATCATTGAAAAGCTTTCTAGAGTTGCCCCAACAGAAGAGGAGAAAATTTTTACACTTGAATACAAAGGAGACCCAGCAACACTTGCTATAGCTGAGTCATTCCTGTATCACATCCTCAAAGCTGTTCCTTCAGCATTTAAGCGCTTAAATGCCATGCATTTCAGGTTAAACTATGACTCTGAGATTCTAGAAATCAAGGAGCTTCTGCAGACACTAGAGTTAGGGTGTAAGGAGCTTCGAAACCAAGGAGTGTTTGTGAAGCTTCTTGAAGCAGTGCTTAAGGCCGGAAATTGTATGAACGCAGGTACTCATAGAGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTAAGAAAGCTCTCAGATGTGAAGAGCATTGATGGAAAAACCACATTGCTTCACTTCGTGGTTGAAGAAGTTGTTCGTTCCGAAGGAAAACATGCTGCTCTTAGCCGCAACAGCAGTGGAAGCTCTGAGAACTCAGTTGTTTCAAATGAGCAAATACAAAGGGAATATATAACACTAGGATTATCTATTGTAGGAGGGGTCAGTTCGGAGTTTTCCAATGTAAAGAAAGCAGCACTTACAGATCACAACAGCTTTGTTGGTTCAATATCAGCACTCACAGCTAGGATGGTTGAAATTAAACAACTTGTTTCACAGTGTGGAAGTGATGAAGAGGGAAACTTTGTGACAGGAATGAACCATTTTCTTGAAAATGTAGAGGAAGAATTGAAATCAGTTAGAGAAGAGCAAACAAGGATAATGGAACTTGTCAAGAGAACAACTAATTATTATCAAGGAGCTACAAAAGATAGTGCAGAACATCCTTTTTATCTATTTGTCATAGTTAAGGATTTTCTAGGAATGGTTGATCAAGCCTGCATTGAGATTGCTCGCAACATGCAGAAGAGGAAGATGTCTAAGGCAAGTTCAGGGTAA	2274	0.4147	MMLLLLTLLFVLHNFVIPTCHCQTQNIETFYPIQTTEPAPTSQLPEPQASPPTPLLLATGPVAASKSSSSNSNIAKAVAATAASSVVISGLLFLLVQRCFRARRRKERISTASVGDRSVAPQINMFEKSGRNIKGLVVDENGLDVIYWRKLQEHKNSKKVLSSAKNKQEDCHEGNQGSIQETPLLRGKSSTSHMNIFPEKPYTIMRILPPAPPPIVSLSVEDAINVVHKPNYPTSPFAPSPPPLPQRPPSLPAPPQPDRKSLAPTLPVPPPPPILGRKGQASPSTPARKSQTPPPPPPPKAVISKSSSKPPPIPIGMPVSTSKRGNSSGEDMSETGNGQVKLKPLHWDKVNTNLDHSMVWDKMKGSFRVDGDLMEALFGNIATNRSTSKGNDSTSPTRDAKAPSTKAFLLDQRRSQNIAIVLKSMAVSQKEIIDALVEGQGLNTEIIEKLSRVAPTEEEKIFTLEYKGDPATLAIAESFLYHILKAVPSAFKRLNAMHFRLNYDSEILEIKELLQTLELGCKELRNQGVFVKLLEAVLKAGNCMNAGTHRGNAQAFNLASLRKLSDVKSIDGKTTLLHFVVEEVVRSEGKHAALSRNSSGSSENSVVSNEQIQREYITLGLSIVGGVSSEFSNVKKAALTDHNSFVGSISALTARMVEIKQLVSQCGSDEEGNFVTGMNHFLENVEEELKSVREEQTRIMELVKRTTNYYQGATKDSAEHPFYLFVIVKDFLGMVDQACIEIARNMQKRKMSKASSG*	758

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan18g0665	757	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	345	751	-	-
	Lan18g0665	757	Pfam	Formin Homology 2 Domain	337	735	IPR015425	-
	Lan18g0665	757	PANTHER	FORMIN-RELATED	3	753	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Lan18g0665	757	MobiDBLite	consensus disorder prediction	166	191	-	-
	Lan18g0665	757	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	332	757	IPR015425	-
	Lan18g0665	757	MobiDBLite	consensus disorder prediction	175	191	-	-
	Lan18g0665	757	MobiDBLite	consensus disorder prediction	383	405	-	-
	Lan18g0665	757	MobiDBLite	consensus disorder prediction	320	335	-	-
	Lan18g0665	757	MobiDBLite	consensus disorder prediction	234	277	-	-
	Lan18g0665	757	MobiDBLite	consensus disorder prediction	383	401	-	-
	Lan18g0665	757	MobiDBLite	consensus disorder prediction	231	343	-	-
	Lan18g0665	757	MobiDBLite	consensus disorder prediction	288	317	-	-
	Lan18g0665	757	Gene3D	Formin, FH2 domain	339	756	IPR042201	-
	Lan18g0665	757	PANTHER	FORMIN-LIKE PROTEIN 4	3	753	-	-
	Lan18g0665	757	SMART	it6_source	331	750	IPR015425	-
	Lan18g0665	757	Coils	Coil	507	527	-	-
	Lan18g0665	757	Coils	Coil	682	702	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan18g0665	Lan-Chr18	11782671	11785638	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan18g0665	301	751	FH2 protein (formin) Gene Family	AT1G70140	52.802	1.73e-162	487

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan18g0665	-		-	gmx:100780368	835.869