Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0638 ATGGACGATGGCGGAAGCAGAGCCGAAGCGGAGCGATGGCTCTACACAGCGAACAAGCTTCTAAGCGCACGTGACTTGCACGGGGCACGCTCCTTCGCTCTCCGCGCCCGCGAATCCGACCAGACTTTGGACGCGTCGGAGCTTCTCCTTACGGTTATCGACACCGTCCTAGCCGGCGAGACTCGTATCAACGACCACCACTGCGACTGGTACGGGATCCTCCAGATCCATCGCTACACCACCAACATCGACCACATCGCCGCCCAGTACCGCCGCCTCGCTCTCCTACTTGACTCTAACCGCAACCCCTTTGCCTTCTCCGGCCACGCCTTCTCTCTCGTCCACGACGCATGGTCCGTCCTCTCCAACCCAGTCAATAAGTCCATGTACGACAACGACCTCCGGTTACTCACTTCGCAACCACCTCCGCCACAGCAACCACAACCTCCGCCTCCCCTGCCGCAGCCTCAGCCGCAACTAAAGAAAAACCCTAGATCTAAAAATGTTTCGACTGAACCGGCTCAAGCCAGGACCGAGCCGAATGAGTCGACTCAGATTGAGTCAGAGGAAGCGAGTTTTTGGACATCGTGTCCGTACTGCTATGTTATGTATGAGTACCCGAAGGTGTACGAAGAGTGTACCTTGCGGTGCCGGAGCTGTAGAAGAGGGTTTCACGCTGTAGTGATTCGATCGCCACCGTTGAATGGGTTAGATGAATCCTTTTGCAGTTGGGGATATTTACCGTTAGGGTTTTCCGGTGATTCAAAAGATGTTAAAGGAGTTGGTTCTAATTGGAACCCATTTTCGCCACACTTCCCTTGCTCCTTGAAAGGGGATACGAAGAAGGAGAAAAGGGGTTGGGTTTATCATGATGAAGATGCTGCAGCCGCGTTCATTGAGATTTCGGAACCTAGTGAGGATGATTCTGATGGAGACTGGAGGGATGGAAAAAGGAGGAAGAGTAAGAGGACAAGGAGTTCCAGGAGGAATTTTTTCTGA 999 0.5335 MDDGGSRAEAERWLYTANKLLSARDLHGARSFALRARESDQTLDASELLLTVIDTVLAGETRINDHHCDWYGILQIHRYTTNIDHIAAQYRRLALLLDSNRNPFAFSGHAFSLVHDAWSVLSNPVNKSMYDNDLRLLTSQPPPPQQPQPPPPLPQPQPQLKKNPRSKNVSTEPAQARTEPNESTQIESEEASFWTSCPYCYVMYEYPKVYEECTLRCRSCRRGFHAVVIRSPPLNGLDESFCSWGYLPLGFSGDSKDVKGVGSNWNPFSPHFPCSLKGDTKKEKRGWVYHDEDAAAAFIEISEPSEDDSDGDWRDGKRRKSKRTRSSRRNFF* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0638 332 MobiDBLite consensus disorder prediction 318 332 - -
Lan18g0638 332 ProSiteProfiles dnaJ domain profile. 69 134 IPR001623 -
Lan18g0638 332 MobiDBLite consensus disorder prediction 160 187 - -
Lan18g0638 332 MobiDBLite consensus disorder prediction 301 332 - -
Lan18g0638 332 Gene3D DnaJ domain 68 135 IPR036869 -
Lan18g0638 332 MobiDBLite consensus disorder prediction 134 187 - -
Lan18g0638 332 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 3 327 - -
Lan18g0638 332 CDD DnaJ 69 123 IPR001623 -
Lan18g0638 332 MobiDBLite consensus disorder prediction 140 159 - -
Lan18g0638 332 Pfam DnaJ domain 69 131 IPR001623 -
Lan18g0638 332 SUPERFAMILY Chaperone J-domain 65 134 IPR036869 -
Lan18g0638 332 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0638 Lan-Chr18 11466189 11467917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0638 9 315 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 41.562 1.26e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0638 - - lang:109332255 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0645 17 5591649 5593879 Lan18g0638 18 11466189 11467917 LSH
Lan18g0638 18 11466189 11467917 Lan6g0660 6 5881979 5883749 LSH
Lan18g0638 18 11466189 11467917 Lan4g0734 4 9600782 9602594 PCT
Lan18g0638 18 11466189 11467917 Lan16g0067 16 386485 388441 PCT
Lan4g0734 4 9600782 9602594 Lan18g0638 18 11466189 11467917 PCT
Lan16g0067 16 386485 388441 Lan18g0638 18 11466189 11467917 PCT