Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0636 ATGGAGGACCAACTCCATCACCATACAAACACAACCAACCCTTCTTCCACCACGCGCTTAAAGCTCTTCGGCTTCAACGTCCACCAACACACCAACGACCAACTGGATGAAACATCAGACTCAACCCCCAAACCCACCTCCCCCGACTCCACCGGCGGCATAGAAGGTGACACCGCCGGCATATCCACCTCCTCCGGCGACCGCAAATACGAGTGCCAGTACTGCTGCCGAGAATTCGCAAACTCTCAAGCACTGGGAGGACACCAAAACGCGCACAAGAAAGAGCGCCAACAACTCAAACGCGCTCAATTACAAGCCACTCGAAACGCTGCTGTTTCATTCGCTCGCAACCCGATCATCTCCGCCTTTGCTCCACCGCCTCATCTCCTCGCTCCGCCGGGTTCCATGATGGTGCCTGCGGGTACACCGTCATGGGTATATATGCAACCACGTGCAGCTCCTCCTCCTTTCCATGTGTCAGTTTCACACGGTTGCGTGTTCCCAAACAGTAACAACGGTGTAAGCAGTAATAGTAACTGTAACGGTGGTAACTATAGCATTGTAACGGGTGCTAGATCCACAGGTACAGGGGTATTACGGTACGGTGGAGGAGTAGAGGATTCCTCTTCCACATTTTCAACGATGGGCTCGCAAGTACAAGGTAGGGCCCACTTTAGCAGAATTGATGGGCTTTCTAAAGGGGAAGTGGGGCCCAGTTTCGATGATGGGTTTGGATTGGACTTGCACCTTAGTTTAGCACCACCGTGA 768 0.5299 MEDQLHHHTNTTNPSSTTRLKLFGFNVHQHTNDQLDETSDSTPKPTSPDSTGGIEGDTAGISTSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFARNPIISAFAPPPHLLAPPGSMMVPAGTPSWVYMQPRAAPPPFHVSVSHGCVFPNSNNGVSSNSNCNGGNYSIVTGARSTGTGVLRYGGGVEDSSSTFSTMGSQVQGRAHFSRIDGLSKGEVGPSFDDGFGLDLHLSLAPP* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0636 255 SUPERFAMILY beta-beta-alpha zinc fingers 66 97 IPR036236 -
Lan18g0636 255 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
Lan18g0636 255 MobiDBLite consensus disorder prediction 31 66 - -
Lan18g0636 255 PANTHER ZINC FINGER PROTEIN 5 10 254 IPR044299 GO:0010090
Lan18g0636 255 PANTHER ZINC FINGER PROTEIN GIS3 10 254 - -
Lan18g0636 255 Gene3D Classic Zinc Finger 57 117 - -
Lan18g0636 255 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 97 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0636 Lan-Chr18 11439785 11440809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0636 10 254 C2H2 Transcription Factor Family AT1G68360 46.038 8.20e-57 180
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0636 18 11439785 11440809 Lan6g0662 6 5897101 5898110 LSH