Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0620 ATGTATTTGATTCTGATCTTGCTATGGACAACGATTTCGAAAGAAACACGGGGCCTAGGAAGTTTTCTTATGAAGAACTTGCTTGAGCAACTAGTATCTCAGGGATCTAAACAAGGGGTGAAGGAGTATGCATCTGAAGTAAAGATCATAAGTCAACTAAGGCATAAGAATTTGGTTCAACTTATTGGTTGGTGTCACCGACAGAATGACCTGCTGCTGATTTATGAGTTTGAGGAAAATGGAAGCTTAGATTCTTATCTGTTTAACAGAAAAGGCACACTGACATGGAATGTACGATACAGCATTGCTAGAGGCCTGGCCTCAGCAGTGTTATATTTGCATGAACAATGGAAGCAATGTGTGCTTCACAGAGACATAAAAGCTAGCAATGTTATGTTGGATTCTAATTTTAATGCAAAGCTCGGAGATTTCGGTTTGGTCAGACTAATAGACCATGAAATAGAATCCAAAACAACAGCTTTGGCAGGAACACTTGGATATATGCCTCCTGAAGCAGCTACCAGAGAGAAGGCTAGTGGAGAGTTGGACATATACGGTTTCGGAGTTGTTGCTTTGGAGATAGCTTGTGGAAGAAAGGCAATAGGTTCAAGTTTGATTCAAGAACAAAAGTACTTGGTGGAATGGATTTTGGAACTTTATGGCAAGGGTGATATCTTTAAAGCTGCTTATCCAAGTTTATGTAGAGACTTTGATGAGAATGAAATGAAGAGGATAATGATAGTTGGACTTTGGTGTACCCAAAAAGATTACCTCTTGAGGCCTACAATGAGGCAAGTTTTTCAGGTGCTTAATTTTGAAATTCCACTTCCCATTCTCCCATCACAGATGGCTGTGCCTAACTATAATACATCTTTGAACTTAATGCCCTCTATGACTCATGCCTTTGAGAATAACCAAACCATGCCTTCAACATCAAGCAATAGCTCCTTCACCGCGTCCTCGCAATCGAGCACAACTTTTGATGTTATTTTTCCATCAGCTGCACTTCTACATGGACATACATGCTAA 1029 0.4004 MYLILILLWTTISKETRGLGSFLMKNLLEQLVSQGSKQGVKEYASEVKIISQLRHKNLVQLIGWCHRQNDLLLIYEFEENGSLDSYLFNRKGTLTWNVRYSIARGLASAVLYLHEQWKQCVLHRDIKASNVMLDSNFNAKLGDFGLVRLIDHEIESKTTALAGTLGYMPPEAATREKASGELDIYGFGVVALEIACGRKAIGSSLIQEQKYLVEWILELYGKGDIFKAAYPSLCRDFDENEMKRIMIVGLWCTQKDYLLRPTMRQVFQVLNFEIPLPILPSQMAVPNYNTSLNLMPSMTHAFENNQTMPSTSSNSSFTASSQSSTTFDVIFPSAALLHGHTC* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0620 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Lan18g0620 342 Gene3D Transferase(Phosphotransferase) domain 1 80 292 - -
Lan18g0620 342 SUPERFAMILY Protein kinase-like (PK-like) 36 313 IPR011009 -
Lan18g0620 342 SMART serkin_6 2 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0620 342 Pfam Protein kinase domain 34 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0620 342 Gene3D Phosphorylase Kinase; domain 1 24 79 - -
Lan18g0620 342 ProSiteProfiles Protein kinase domain profile. 1 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0620 342 PANTHER - 32 336 - -
Lan18g0620 342 PANTHER LECTIN RECEPTOR KINASE 32 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0620 Lan-Chr18 11296022 11297148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0620 35 289 Receptor kinase-like Gene Family AT5G10530 57.364 2.51e-101 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lan18g0620 Pkinase 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0620 - - lang:109332544 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0620 18 11296022 11297148 Lan18g0620 18 11296022 11297148 ECH