Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0616 ATGGAGAACTACCCATACCCACCCTACCCAGAATCCCATGAATCCTCTCCGCGTTCAAGGGACACTGACTTTGAAAACCCGCCGCCATGGGACGATCAGCAACCGCCACCTAACTACAAAGCCAAATTCATGTGCAGCTACGGCGGCAAGATCCAACCCCGCACCCACGACAACCAACTCTCCTACGTCGGCGGTGAGACCAAGATCCTCGCCGTCGATCGCCACATCAAGTTCCCTTCCTTCATATCCAAACTTTCCACCCTCTCCAACATCACACCAGAACAACTCGCACTAAAATACCAACTCCCAGACGAAGAACTCGACGCTCTAATTTCTGTAACTAACGACGATGACCTTGATCATTTGATGCACGAGTATGATCGTCTCTACCGTGCTTCTTCTAGACCCGCACGCATGCGATTATTTCTCTTTACGAATCCTACTCCTACCCCTACTACTCCTCCTGTTACTACTGCTTCTTTCTCCTCCGAGTGTGATCGCTTCGTTGAAGCTCTTAATTCTGGTGGACTTCCGGTTCAGCCTGAACCGATTAAGCCGCAACCTCTTATGCATGGTAATGTTGATTTCCTCTTCGGATTGGACAAGACTGTAGCTCCGCCGCCACCGATTGCAGCGGTGAAGTTCCACGATCCGGTGCCTGATCCTGTTGCACCGGATCCTGTTGATCGGAGAGTTGGATCGGATGCGAATGTGAACCCGATCGAGATACAGAGGCAGTTACAACAGATGCGAATTGCAGAGAGTGAGCAGCAATATAGGAGAAGAAGCGAGGACGGTTTTGCCGGTGGTTTTACCGGCGGTTCCGGAGATTATTACATGCAGAAGGTTCCGGAGAAAGTTTCGCCGTCAAATTCGCCAGTAAGCGTGCCGCATCATGGTGGTTTCTATCCAGAGAGGCAGTTATCCGGCGTCGGTTTTCAGCCTACGGTGACGACGGCTCACGGAGGAGTTGACCAACATGTGTATATGGTCTCAGCGCCGGGACCGTACTATCATGCGCCACACGCGCCGGTGGTACGTCCGTCAGTGACCCAAGGGTATTACGCTGTGCAACGAATGGGTTCTGATGGTTACCGTGAACAGACGATGTACGGCGGCGTGGCTCCTCCTAAAACGGTGTTTTCGTCGGTGGCTCCATCGGGTTTGGCACCGGGACAGCAGGTTAGAGGTTCCACGTATGCAGAAGGATACGGTGTCATAAGGCAAGCTGGGGTGCCAGATAACAGTGCTGCTACGTACGCGCAGATGACTTATGATAGCGCGAGTGGAAGACAGGTGTACTATAATGCGCCGGCAGGGGTGATGCACGCGCCTCCGTTCCAAGGGGCGTCTCCGGCGATCAATGCGACGGATATGAGATCGGGTGGGGTTTCATCGGGTCAGGATGTGAAAGTGGTAAACAAGGTTAACCAAGGTCCTGTGTGA 1446 0.5297 MENYPYPPYPESHESSPRSRDTDFENPPPWDDQQPPPNYKAKFMCSYGGKIQPRTHDNQLSYVGGETKILAVDRHIKFPSFISKLSTLSNITPEQLALKYQLPDEELDALISVTNDDDLDHLMHEYDRLYRASSRPARMRLFLFTNPTPTPTTPPVTTASFSSECDRFVEALNSGGLPVQPEPIKPQPLMHGNVDFLFGLDKTVAPPPPIAAVKFHDPVPDPVAPDPVDRRVGSDANVNPIEIQRQLQQMRIAESEQQYRRRSEDGFAGGFTGGSGDYYMQKVPEKVSPSNSPVSVPHHGGFYPERQLSGVGFQPTVTTAHGGVDQHVYMVSAPGPYYHAPHAPVVRPSVTQGYYAVQRMGSDGYREQTMYGGVAPPKTVFSSVAPSGLAPGQQVRGSTYAEGYGVIRQAGVPDNSAATYAQMTYDSASGRQVYYNAPAGVMHAPPFQGASPAINATDMRSGGVSSGQDVKVVNKVNQGPV* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0616 481 SUPERFAMILY CAD & PB1 domains 56 150 - -
Lan18g0616 481 SMART PB1_new 55 146 IPR000270 GO:0005515
Lan18g0616 481 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P (PB1) DOMAIN PROTEIN 1 477 - -
Lan18g0616 481 PANTHER OS05G0427100 PROTEIN-RELATED 1 477 - -
Lan18g0616 481 CDD PB1_UP2 44 144 - -
Lan18g0616 481 MobiDBLite consensus disorder prediction 1 38 - -
Lan18g0616 481 Pfam PB1 domain 56 144 IPR000270 GO:0005515
Lan18g0616 481 Gene3D - 61 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0616 Lan-Chr18 11225475 11227047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0616 39 174 MAP Kinase Kinase Kinase AT5G57610 41.912 1.08e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0616 - - adu:107480527 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0616 18 11225475 11227047 Lan16g0085 16 701639 703345 PCT
Lan16g0085 16 701639 703345 Lan18g0616 18 11225475 11227047 PCT