Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0611 ATGTCTTCTCAAGCACGTGATCAACAGTGCCATAACTTGCACTTTTTCAAGGTTATTCTTGAAAGCAACATTCGAGATGGAGATCTGAGGGTGCCAAAGGGTTTTGTGAAGAGATGCTGGCAAGAAATAACAAATCCAGTTTTTCTAAGGCTTCCAAATGGCACTGAAAGGAGAGTTTATTGGATTAAAAAAGATGGTGATGTTTGGTTTTCCAATGGTTGGAAAGAATTTGCACAATACTTGTCATTGGAAGTGTCACAGTTTCTGGTGTTTCGATATGAAGGAAAATCTCGATTTTATGTTATCATATTTGGAAAAAGTGCATTAGAAATAAAGTACCCCTTACCAGAAAATGAAGAGGTTAGCAATGGCAGTGATTACTCCTTGAAAATTGTTGATGATTTTGATATAATTAACTGTAAAAGGCACAAATCTCCAAAACCATGTTCTCAAGCTCCTAAAAAACTGAAAACCAATCCAAAAGAAGAACATGAATACTACTCCAGCCATGCTGAAACTAGGCTTCAGAAGTGGAAATCCCATAATGCAGGTCTTAGTAATGCTAAGAACAATGGGGGAAGTAGCAGAGATCTTTATGAGAGAATCAATGCTTTCCACAAGAAAGTGAATCAGAATTTCTACTCTGAGAATCATTGGTTCACATGTACACTGCAGAAAACTTGCTTCCAAAGAGATCTCTTGGTCATACCAAAAGATTTTGCTAGAACAAATCTGCACAAGAAGGAAGGAGAAGCTACCCTTTCTTTGATGAAGGATGGTAAGGGCAGAACTTGGGATGTCATGATAAAGCACTATTCCCGCAATAGACTTTCAGCATTTGTTGGTGGTTGGATTAACTTTGTGGAGGACAATAATTTGAAAATAGGTGATGTTTGTGTCTTTGTGCTAAACAAGTGTAAGAAAGTTTCATTCCAAGTTGTTATTTTTCCTTTTGAAGATGACACTAGCCTTCTCCACTTTACAGAGCAAAAAGGGTTTTCTAATAGGCCTTCTTCATGCCTTAAAGACCCTGAAGCTCCCAAAGCTAACATCAGAGTGTCATCCATTAATCACTTCACCATCCACATCAAGGACAGTTCATATCTTACGTCAATACCAATGAGCTTCATGAGGAATTACGTTACACTTGGTGGAAAAAAAGCAAAGTTAAGAGTTGGGAAGAGAACATGGGATGTAAAAGTGCAATATTATCAAACTAGAACCTATGCTAGATTCACTGATGGTTGGCGTGATTTTACTAAGGAATGCAACTTGAATGTGGGTGATTCTTGTCTATTTGAGATTATAGATGAGGAGAATTTTGAGCTCAATGTTTCAATTATGAAATACACCCACTAA 1359 0.3731 MSSQARDQQCHNLHFFKVILESNIRDGDLRVPKGFVKRCWQEITNPVFLRLPNGTERRVYWIKKDGDVWFSNGWKEFAQYLSLEVSQFLVFRYEGKSRFYVIIFGKSALEIKYPLPENEEVSNGSDYSLKIVDDFDIINCKRHKSPKPCSQAPKKLKTNPKEEHEYYSSHAETRLQKWKSHNAGLSNAKNNGGSSRDLYERINAFHKKVNQNFYSENHWFTCTLQKTCFQRDLLVIPKDFARTNLHKKEGEATLSLMKDGKGRTWDVMIKHYSRNRLSAFVGGWINFVEDNNLKIGDVCVFVLNKCKKVSFQVVIFPFEDDTSLLHFTEQKGFSNRPSSCLKDPEAPKANIRVSSINHFTIHIKDSSYLTSIPMSFMRNYVTLGGKKAKLRVGKRTWDVKVQYYQTRTYARFTDGWRDFTKECNLNVGDSCLFEIIDEENFELNVSIMKYTH* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0611 452 PANTHER B3 DOMAIN-CONTAINING 8 316 - -
Lan18g0611 452 PANTHER B3 DOMAIN-CONTAINING 349 449 - -
Lan18g0611 452 Gene3D - 7 108 IPR015300 -
Lan18g0611 452 CDD B3_DNA 14 104 IPR003340 GO:0003677
Lan18g0611 452 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 349 449 - -
Lan18g0611 452 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 8 316 - -
Lan18g0611 452 SMART B3_2 220 319 IPR003340 GO:0003677
Lan18g0611 452 SMART B3_2 15 107 IPR003340 GO:0003677
Lan18g0611 452 SMART B3_2 358 451 IPR003340 GO:0003677
Lan18g0611 452 ProSiteProfiles B3 DNA-binding domain profile. 355 451 IPR003340 GO:0003677
Lan18g0611 452 Gene3D - 344 451 IPR015300 -
Lan18g0611 452 Gene3D - 201 320 IPR015300 -
Lan18g0611 452 ProSiteProfiles B3 DNA-binding domain profile. 14 107 IPR003340 GO:0003677
Lan18g0611 452 SUPERFAMILY DNA-binding pseudobarrel domain 11 107 IPR015300 -
Lan18g0611 452 ProSiteProfiles B3 DNA-binding domain profile. 219 319 IPR003340 GO:0003677
Lan18g0611 452 SUPERFAMILY DNA-binding pseudobarrel domain 358 447 IPR015300 -
Lan18g0611 452 CDD B3_DNA 234 317 IPR003340 GO:0003677
Lan18g0611 452 Pfam B3 DNA binding domain 370 448 IPR003340 GO:0003677
Lan18g0611 452 Pfam B3 DNA binding domain 220 313 IPR003340 GO:0003677
Lan18g0611 452 Pfam B3 DNA binding domain 15 106 IPR003340 GO:0003677
Lan18g0611 452 CDD B3_DNA 358 447 IPR003340 GO:0003677
Lan18g0611 452 SUPERFAMILY DNA-binding pseudobarrel domain 215 317 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0611 Lan-Chr18 11175696 11178499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0611 372 449 B3 DNA Binding Superfamily AT3G18990 32.051 6.30e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lan18g0611 B3 6.1e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0611 - - lang:109332968 945.266