Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0605 ATGGCTTCTCGTAACCAGAACAAACCTCCTCGCAGCCCCTCTAATAAAAAGGGTGGTAGAACAGAAGAGTTATTTGTAGACAAGCGTGGAAGAATTGGAGCTGAAAAGATGGAACAACGAGGAGCCGTTGGTAAGGCCAGAGCGCCGCTTTCTTCGATGAAAGTTCGGTCTGATACTAATGCAGGGAGTGAAGTTGGCAGCAATGAGGGGATGGAATGTAGTGTTGTTGAGTTTACAAAAGAGGATGTAGAAGCGTTGTTGAATGAGAAGAGGAAAAAAGGGGACCCCTTTGATAATAAGAAAAAACAGGAGCTGATGGCCGCTTATATTAAGCGGCTTAAGCTTTGTGTTCGATGGTTTATTAAAGTTGAAGAAGGCTATGTCCAAGAAAAAGAGAAGCTTCAGTCTGAACTAGAGTCACTTGAGAAGAAGTGCAGTTATACTGAGATTGAGATGAAAAATAAGATGGAGGAGTTGAATGAGACAATATCTGATTTAAGGAGGACAATTACCTCTTTAGAAGAGAGAATTGCGAAGGAAGAATCGGATAAGCTGGAAGCAATTAATTGTTATAAAAAAGAAAAGGAAGCCAGAAGTGTGGCTGAGAAAGTTAGGGATGAGAAATCAGCTGAGCTCGAGAAAGTTTTGGATCAGAAATCAGTTGCTGAGCAGCAGGCCATTTCAAATGAGGACTTGTACAAGCGATCTCAAGAGTATAACATGAGTTTGCAGCAGTACAATAGCCGTCTTCAGTCAGATCTTGATACTTCTAATGAAGCACATAAGCGACTTGAAATAGAGAAAGCAACCATTGTTGAGAGCCTTAGCATTGTAAGAGGTCATAATAAGGCATTGCAAGATCAGTTGGTATCTCTTAAAGTTTCACAGGATGAGGCTATAAAGCAAAAAGAAACCTCAAAAAATGAGCTCATATGCCTTCGTGAAGAATTAAAACAAATTAGAGATGAACGTGATCGCCAACAGGGACAAATAAAGGCTTTAGTAGGAGAAGTAGCGAAGTACAAAGAATATACAGGGAAATCGTTTGCACAATTGGATACTTTCATAATTAAAGCAAATGCTCTTGAGGTAACATGTTCTTCTCAAAAGGAGCAAATACTTCAACTGCAACAGTTGTTGTTTGCTGAAAAGGAGAAGCTAAAGATGGCTGATTTATCAGCTTCGACAAGCAGAACAGTATTTGAAGAGCAAAGAAGACTTATATGTGAATTACAAGACCGATTGGCTGATAAGGAAATTCAATTAGTTGAAGGAGAGAAGCTAAGGAAAAAGCTACACAACACTATCCTGGAATTAAAGGGAAATATTCGTGTGTTTTGCCGTGTGCGACCTTTGCTGCCAGAGGATGGTACAGGATCAGACATGGTTGTTTCTTACCCTAATTCAACAGAATCACTTGGACTGGGCATTGAATTGGTGCAAAGCGGGCAGCAGTACCCTTTTACATTTGATAAGGTGTTTGATCATGAAGCTTCTCAGCATGATGTTTTCATAGAGATATCACAGTTGGTGCAAAGTGCACTTGATGGCTACAAGGTTTGCATCTTTGCTTATGGGCAGACAGGTTCTGGCAAAACCTATACAATGATGGGTAGGCCTGATGCCCCGGATCTGAAAGGGTTGATACCTCGTTCTCTAGAACAGATATTCCAGACTAGTCAGTCCCTGAAAGACCAAGGGTGGAAGTACAAAATGCAGGCATCCATATTGGAAATATATAACGAGACCATTCGAGATTTGTTAGCTTCAAATCGGTCAAGTGGGATGGATCAAGCGCGAACAGAGAACGGTGTTCCTGGCAAGCAGTACACTATTAAACATGATGCAAATGGAAACACACTTGTTTCTGACCTGACCATTGTTGATGTGTGTAGTGTGAATGAGATTTCTTCTCTCCTGCAAAAGGCTTCACAAAGCAGGTCGGTGGGAAGAACACAGATGAATGAACAATCATCAAGAAGCCATTTTGTCTTTACTTTGCGTATATGTGGGATTAATGAGAACACTGAACAACAAGTGCAAGGTGTGCTAAACTTGATTGATTTGGCCGGAAGTGAAAGACTGTCAAGGAGTGGGGCAACTGGGGACCGATTAAAGGAAGCCCAGGCAATCAACAAAAGTCTCTCCTCTTTGAGTGATGTCATCTTTGCTTTGGCGAAGAAAGAGGATCATGTTCCATTTAGAAATTCGAAACTAACATACCTTCTCCAGCCATGTCTTGGCGGGGACTCAAAAACATTAATGTTTGTCAACGTCTCACCTGATCAATCTTCAACCAGTGAGTCACTTTGCTCTCTCCGTTTTGCGGCCAGAGTCAATTCCTGTGAAATTGGAATTCCACGGCGGCAGACTCAGACATCCACATGA 2388 0.4154 MASRNQNKPPRSPSNKKGGRTEELFVDKRGRIGAEKMEQRGAVGKARAPLSSMKVRSDTNAGSEVGSNEGMECSVVEFTKEDVEALLNEKRKKGDPFDNKKKQELMAAYIKRLKLCVRWFIKVEEGYVQEKEKLQSELESLEKKCSYTEIEMKNKMEELNETISDLRRTITSLEERIAKEESDKLEAINCYKKEKEARSVAEKVRDEKSAELEKVLDQKSVAEQQAISNEDLYKRSQEYNMSLQQYNSRLQSDLDTSNEAHKRLEIEKATIVESLSIVRGHNKALQDQLVSLKVSQDEAIKQKETSKNELICLREELKQIRDERDRQQGQIKALVGEVAKYKEYTGKSFAQLDTFIIKANALEVTCSSQKEQILQLQQLLFAEKEKLKMADLSASTSRTVFEEQRRLICELQDRLADKEIQLVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPEDGTGSDMVVSYPNSTESLGLGIELVQSGQQYPFTFDKVFDHEASQHDVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPDLKGLIPRSLEQIFQTSQSLKDQGWKYKMQASILEIYNETIRDLLASNRSSGMDQARTENGVPGKQYTIKHDANGNTLVSDLTIVDVCSVNEISSLLQKASQSRSVGRTQMNEQSSRSHFVFTLRICGINENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKEAQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNVSPDQSSTSESLCSLRFAARVNSCEIGIPRRQTQTST* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0605 795 MobiDBLite consensus disorder prediction 1 67 - -
Lan18g0605 795 ProSiteProfiles Kinesin motor domain profile. 442 782 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0605 795 ProSitePatterns Kinesin motor domain signature. 682 693 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lan18g0605 795 SMART kinesin_4 440 790 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0605 795 MobiDBLite consensus disorder prediction 53 67 - -
Lan18g0605 795 Coils Coil 247 267 - -
Lan18g0605 795 PRINTS Kinesin heavy chain signature 517 538 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0605 795 PRINTS Kinesin heavy chain signature 652 669 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0605 795 PRINTS Kinesin heavy chain signature 683 701 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0605 795 PRINTS Kinesin heavy chain signature 732 753 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0605 795 CDD KISc_C_terminal 440 784 - -
Lan18g0605 795 Coils Coil 296 337 - -
Lan18g0605 795 Pfam Kinesin motor domain 448 781 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan18g0605 795 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 792 - -
Lan18g0605 795 Coils Coil 205 225 - -
Lan18g0605 795 Coils Coil 124 183 - -
Lan18g0605 795 MobiDBLite consensus disorder prediction 15 42 - -
Lan18g0605 795 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 403 781 IPR027417 -
Lan18g0605 795 Gene3D Kinesin motor domain 386 784 IPR036961 -
Lan18g0605 795 PANTHER KINESIN-LIKE PROTEIN 3 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0605 Lan-Chr18 11065860 11072057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0605 403 781 Calmodulin-binding Proteins AT5G65930 39.589 2.59e-80 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0605 K10405 - gmx:100808278 1156.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0605 18 11065860 11072057 Lan19g1010 19 17398752 17404563 PCT
Lan18g0605 18 11065860 11072057 Lan16g0100 16 774158 779726 PCT
Lan19g1010 19 17398752 17404563 Lan18g0605 18 11065860 11072057 PCT
Lan16g0100 16 774158 779726 Lan18g0605 18 11065860 11072057 PCT