Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0602 ATGAGCCAAATTCTCCTAATTTTGTTAATAGGGATTGGTATAGGCTTTCTTGTCGGATTGAGTTTGGCATTTTCAATTTTATTGTGCCTCAAGTGTGGAAGGAAGCGGGAACAGGAGGAGAAGTGTTCTTCTCCGAGAGCAATGGTCGTTCCTGTTGGTGCCAGAGGGGTTGATTCCAGAACAACATCAGCAAACTCCTCTAATGTGGGTCTGGAGTCACCAAGAACTTCTGAGTGGAGTAACATGCCTTTATGGTTGGAAGGACTTAGGAGAAAGAATGTAGTTTCAGCATGTGGAATTCCCAAATATTCTTACAAAGATATACAAAAAGCAACCTCTAATTTCACAACCATCATAGGCCATGGAGCGTTCGGCTCTGTTTACAAAGCACAGATGTCCACAGGTGAGACAGCTGCGGTTAAAGTTCTTGGTACCAATTCAAGACAAGGAGAAGGGGAATTTTTAACAGAGGTCCTATTACTTGGAAGATTACATCATAGGAACCTTGTGGGTTTGGTGGGATATGGTGCAGAAAGAGGACAGCACATGCTACTTTACACTTATATGAGCAACGGCAGTCTTGCTTCTCATTTGCATGGCGAAAAACATGAACCATTGAGCTGGGATGTGAGACTTAGTATAGCATTAGATGTTGCAAGAGGACTGGAATATCTACATTATGGGGCTTCTCCACCTATTGTGCACCGTGACATCAAATCATCTAATATTCTGTTGGACCAGTTTATGAGAGCAAAGGTCACTGACTTTGGTCTTTCCAGACCAGAGATGACGAAACCTCGTGTAACAAATATCAGAGGAACTTTTGGATACCTAGATCCTGAGTATATGTCTACAGGAACGTTCAGTAAGAAAAGTGATGTTTATAGCTTTGGAGTAGTACTGTTTGAGCTTATTACTGGAAGGAATCCACAACAGGGTCTCATGGAATATGTAAAACTAGCAGCCATGGAAGGCGAGGGTACAGTTGGATGGGAGGAAATTGTGGATTCACAACTGAATGGAAATTATGATGTGCACATGCTCAATGATGTGGCTTCACTTGCACTCAAATGTGTCAATGAAGTCTCTAAAAGCCGACCTCCAATGGCGGAAATTGCTCAAGAATTATATCAGTTCCGTAAGGGACATAGTAAAATTCTTACCAGAACATCTCAAGAATTATCTCTGTTTAGTAGTAAAAATCATAGCAATAGCAGAATAACTACTACAGAATCAAAGGAAGTTTGCATTGACTTGGATCAGCTAAAAGCCTTGGACCACGCATCTAAAGAGCATTCTTCAACGGAGATGCATAGATTGCATATCCAATAG 1332 0.4137 MSQILLILLIGIGIGFLVGLSLAFSILLCLKCGRKREQEEKCSSPRAMVVPVGARGVDSRTTSANSSNVGLESPRTSEWSNMPLWLEGLRRKNVVSACGIPKYSYKDIQKATSNFTTIIGHGAFGSVYKAQMSTGETAAVKVLGTNSRQGEGEFLTEVLLLGRLHHRNLVGLVGYGAERGQHMLLYTYMSNGSLASHLHGEKHEPLSWDVRLSIALDVARGLEYLHYGASPPIVHRDIKSSNILLDQFMRAKVTDFGLSRPEMTKPRVTNIRGTFGYLDPEYMSTGTFSKKSDVYSFGVVLFELITGRNPQQGLMEYVKLAAMEGEGTVGWEEIVDSQLNGNYDVHMLNDVASLALKCVNEVSKSRPPMAEIAQELYQFRKGHSKILTRTSQELSLFSSKNHSNSRITTTESKEVCIDLDQLKALDHASKEHSSTEMHRLHIQ* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0602 443 ProSiteProfiles Protein kinase domain profile. 113 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0602 443 PANTHER OS01G0253100 PROTEIN 3 390 IPR045271 GO:0004714|GO:0006468
Lan18g0602 443 ProSitePatterns Protein kinases ATP-binding region signature. 119 141 IPR017441 GO:0005524
Lan18g0602 443 SUPERFAMILY Protein kinase-like (PK-like) 98 377 IPR011009 -
Lan18g0602 443 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 3 390 - -
Lan18g0602 443 SMART serkin_6 113 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0602 443 CDD STKc_IRAK 119 376 - -
Lan18g0602 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Lan18g0602 443 Pfam Protein tyrosine and serine/threonine kinase 115 376 IPR001245 GO:0004672|GO:0006468
Lan18g0602 443 Gene3D Phosphorylase Kinase; domain 1 83 188 - -
Lan18g0602 443 Gene3D Transferase(Phosphotransferase) domain 1 189 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0602 Lan-Chr18 11052059 11057335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0602 99 378 Receptor kinase-like Gene Family AT3G19300 44.561 2.78e-77 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lan18g0602 PK_Tyr_Ser-Thr 5.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0602 - - lang:109332283 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0602 18 11052059 11057335 Lan18g0602 18 11052059 11057335 ECH