Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0597 ATGAAGTTCAATAATCTTAGTCCATTTTTTATGCTGTTGCTCTTGACCTCTTGTTACCACTCACTAGACACTATAACCACAACCCACCCCATCAAAGACGGTGATGTTTTGGTCTCCAACAACCGAGGAACCTTTGCACTGGGTTTCTTCAGCCTTGGAAATTCTAGTAGCAGATACGTTGGTATATGGTACAACAAAGTTCCACAACAAACGGTTGTGTGGGTTGCCAATAGAGACTACCCTCTACATGACACTTCTGGTGTTCTTTCAATCAATAACCATGGAAACCTTGTACTCCACGATAACATCACCCAAAACGTTAACCCCATTTGGTCTTCAAACGTTTCTGTCTTGTCTACCAACACTTCAGCTAAGCTTTTGGACACAGGAAACTTGGTTTTGACCCAGAATGCAAGCAGCAATAACAGTGTAATATGGCAGAGTTTTGATTATCCTGGTAACACTCTCCTCCCTTTCATGAAGCTCCGTCTAGACCGGAAAACCAAGTTAAACCGGTTCTTAAGATCGTGGAAATCCCCAACCGACCCAGGAACCGGAAACATGACCTGCATGATCGACCCTTCAGGGTTCCCTCAACTGTTCCTGAACAAGAACAATTCTCCATTATGGCGTGGTGGCTCATGGACCGGTCAAAGATGGACAGGTGTGCCAGAAATGACCAACAACTTCATCTTCATCGTTAGCTTCATTGATAACGCAGATGAAGTTTCCATAACTTATGGAGTGAAAGACCCCAACGTGTTCTCCATAATGGTGCTTGAAGAAACGGGTCACCTGAGAAGGCTCACGTGGCAAGCTCGTGAACATAGGTGGTTCGAAATCTGGTTTGCTCCGAAGGAAGAATGCGACAATTTTAGACGGTGTGGTTCGAACACAAACTGTAACCCTTATAATGCTGATAAGTTTCAGTGTGAGTGTTTACCTGGGTTTGAACCAAGGTTCGAGCGAGAGTGGTACCTTAGAGATGGGTCAGGTGGGTGTGTGAGGAAGAACAATGTGTCCACGTGTCGAAGTGGGGAGGGGTTTGTGAAAGTGGCACGTGTTAAGGTGCCAGATACTTCAATGGCACGTGTGGATGAGAAACTGAGCTTGAAAGAGTGCAGGGAGAAATGTTTGAGTGATTGTTCATGTGCAGCATATACAAGTTCCAATGAGATTTCAGAAAGTGGGTGTGTTAGTTGGCATGGAAACATGGAAGATACAAGGACATATTCAGAAGTGGGACAAAGTTTGTATGTTCGTGTGGATAAACTTGAATTAGCTAAATATGCAAAGCATCCTTATGGTTCTCTTGGCAAGAAGGGGATAATAGCAATATCGTCAGTTTCTATTTGCTTGTTAGTATTTATGGTGGTCATTTTCTGGTATTGGTTTGTGAAAGCCAGGAATCAATGGCAAAGAAGGGATCGCAAGTATTCATTTCGTCTTACCTTTGAGGATTCTCCTAGTTTACATGAATTTAACAGCACACAGAATTCAGATTTGCCATTCTTTGATCTTAGCTCCATAGCTGCTGCAACAGACAATTTTTCAACTGATAACAAACTTGGTCAAGGTGGTTTTGGTTCTGTTTATAAGGGTCAATTAAGTAATGGAATGACAATAGCAGTGAAGAGACTGTCAAAGTATTCTGGGCAAGGCATTGAAGAGTTTAAAAATGAGGTTGTTTTGATTTCAAAGCTCCAACACAGAAATCTTGTGAGGATTTTAGGTTGTTGTGTTCAAGGAGAGGAGAAGATGTTAATCTATGAGTATTTGCCAAACAAAAGCTTGGACTCTTTCATTTTTGATGAAACTAAAAGGTCACTTCTAGACTGGGGAAAACGATTCGATATCATTTGCGGGATTGCTAGAGGGATCTTATACCTTCATCACGATTCGCGTTTAAGAATCATTCATAGAGACCTAAAGGCCAGCAATGTCTTGCTGGACTCTGCAATGAACCCAAAAATTGCAGATTTTGGTATGGCTAGAATATTTGGTGGAGAACAAATTGAAGGAAACACAAATCGTGTGGTTGGAACCTACGGGTATATGTCACCAGAATATGCCATGGAAGGAAACTTTTCAATAAAGTCTGACGTGTACAGCTTCGGAGTTTTGCTTCTAGAGATTGTTACAGGCAGAAAGAATAGCGGTCAATATGAGGACATTACAAGCACAAATCTAGTTGGCCATATTTGGAATCTATGGAGAGAAGGCAAAGCCATGGAGATTGTAGACCAGTCATTAGGAGAATCATGCTCTGACCATGAAGTCGAAAGATGCATCCAAATTGGGCTTTCATGTGTACAAGATTATGCCTTGGACAGACCATCTATGTCAATAGTTGTTTCTATGTTGAGTAATATTGAATCCACTCTTCCTACACCAAAATACCCTGCATTCATTTTCAAGAAAACTCCACATGATAGTTCAAATCCATCAACCAGTGAAGGAATTTATTCAGTAAATGAGGTAAGTATAACTATGATTGAAGCTCGCTGA 2508 0.4143 MKFNNLSPFFMLLLLTSCYHSLDTITTTHPIKDGDVLVSNNRGTFALGFFSLGNSSSRYVGIWYNKVPQQTVVWVANRDYPLHDTSGVLSINNHGNLVLHDNITQNVNPIWSSNVSVLSTNTSAKLLDTGNLVLTQNASSNNSVIWQSFDYPGNTLLPFMKLRLDRKTKLNRFLRSWKSPTDPGTGNMTCMIDPSGFPQLFLNKNNSPLWRGGSWTGQRWTGVPEMTNNFIFIVSFIDNADEVSITYGVKDPNVFSIMVLEETGHLRRLTWQAREHRWFEIWFAPKEECDNFRRCGSNTNCNPYNADKFQCECLPGFEPRFEREWYLRDGSGGCVRKNNVSTCRSGEGFVKVARVKVPDTSMARVDEKLSLKECREKCLSDCSCAAYTSSNEISESGCVSWHGNMEDTRTYSEVGQSLYVRVDKLELAKYAKHPYGSLGKKGIIAISSVSICLLVFMVVIFWYWFVKARNQWQRRDRKYSFRLTFEDSPSLHEFNSTQNSDLPFFDLSSIAAATDNFSTDNKLGQGGFGSVYKGQLSNGMTIAVKRLSKYSGQGIEEFKNEVVLISKLQHRNLVRILGCCVQGEEKMLIYEYLPNKSLDSFIFDETKRSLLDWGKRFDIICGIARGILYLHHDSRLRIIHRDLKASNVLLDSAMNPKIADFGMARIFGGEQIEGNTNRVVGTYGYMSPEYAMEGNFSIKSDVYSFGVLLLEIVTGRKNSGQYEDITSTNLVGHIWNLWREGKAMEIVDQSLGESCSDHEVERCIQIGLSCVQDYALDRPSMSIVVSMLSNIESTLPTPKYPAFIFKKTPHDSSNPSTSEGIYSVNEVSITMIEAR* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0597 835 Pfam S-locus glycoprotein domain 210 320 IPR000858 GO:0048544
Lan18g0597 835 PIRSF SRK 1 835 IPR024171 GO:0004674
Lan18g0597 835 CDD STKc_IRAK 523 791 - -
Lan18g0597 835 SMART ntp_6 344 422 IPR003609 -
Lan18g0597 835 Gene3D Phosphorylase Kinase; domain 1 482 592 - -
Lan18g0597 835 CDD B_lectin 28 152 IPR001480 -
Lan18g0597 835 Pfam Protein tyrosine and serine/threonine kinase 519 787 IPR001245 GO:0004672|GO:0006468
Lan18g0597 835 Pfam D-mannose binding lectin 71 178 IPR001480 -
Lan18g0597 835 ProSiteProfiles Bulb-type lectin domain profile. 22 147 IPR001480 -
Lan18g0597 835 ProSiteProfiles Protein kinase domain profile. 517 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0597 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 183 IPR036426 -
Lan18g0597 835 ProSiteProfiles EGF-like domain profile. 285 322 IPR000742 -
Lan18g0597 835 SUPERFAMILY Protein kinase-like (PK-like) 500 818 IPR011009 -
Lan18g0597 835 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 44 831 - -
Lan18g0597 835 Pfam PAN-like domain 343 407 IPR003609 -
Lan18g0597 835 SMART blect_4 28 152 IPR001480 -
Lan18g0597 835 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 44 831 - -
Lan18g0597 835 ProSiteProfiles PAN/Apple domain profile. 343 423 IPR003609 -
Lan18g0597 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Lan18g0597 835 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Lan18g0597 835 Gene3D Transferase(Phosphotransferase) domain 1 593 798 - -
Lan18g0597 835 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Lan18g0597 835 SMART serkin_6 517 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0597 835 Gene3D - 18 149 IPR036426 -
Lan18g0597 835 CDD PAN_AP_plant 341 422 - -
Lan18g0597 835 Pfam Domain of unknown function (DUF3403) 792 835 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0597 Lan-Chr18 10974994 10982337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0597 442 803 Receptor kinase-like Gene Family AT4G23190 53.699 2.41e-131 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan18g0597 PK_Tyr_Ser-Thr 4.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0597 - - gmx:100812814 1353.96