Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0596 ATGACGTCACACCACCTCCCTGAGTTCGACACTGACTCAGTCACCTCATCCCCTCGCTCCGACCACTTCCATGAACCACCGCCACGTGTCCGCTTTATGTGCAGCTTCGGTGGCAAGATCCTTCCCCGCCCCCACGACAACCAGCTCCGATACGTCGGTGGCGACACCCGAATCGTCGCCATCCACCGCTCCATCTCCTTCTCCGCCCTCCTCCTCAAACTCTTTAAACTCTCAGGCATGACTAACATAACGGTGAAGTACCAGCTTCCAAACGAGGACCTTGACGCGTTGATCTCCGTTACGACGGACGAAGACGTGGAGAACATGATGGACGAATACGACCGCGTCGCACGGAATCAAAACTCGCGATCAGTTCGTCTTCGACTTTTCCTCTTCCCCGAAACAGAACCGGAACCTTCTCGAACCAACAGCATAAGCTCACTCCTAAACGGTTCAGCAAACCGCGAAAACTGGTTCCTAGACGCACTAAACGGCGGCGTTTCAGGTGCACTTGAACGAGGACGCTCCGAAGCTTCTTCAATGCTTTCAGAAGTACCCGATTACTTATTCGGATTGGATCATAACTCCGACGAAACACAACAACAACGTGAACCACGACCCAATAACCGACCCGTTTTACAAGACAACGTTTCAAATTCGGATCCGGGTTCTCCTGCCCCGATTGTTTCTTCGCCGTTTTGTTCCTCATCATCAGCACCTTCTATCCCAAACCTTCCACCGGTTAAAACTAAACTCTCAAACTCTTTTACCGAATCAAGGGGAAGTCAAGTTGAAGCTGAAACGGGTGGGCAAGTAAACCCGAACACGTACCCGGTTAACCAAGTAGTACACTACGCACCAGATGCTGCTTATTCTGGTCACTCTGTACAAACGATTCCGGTTTATTATTATCCCGGTCCGGTTCAACCAGGTACTGTACCGGTCCAACCGGTTCCTATGCAGGCACCATATCCATATGTTCAACAACAACCATATCATCACGCTGTGGGACCGGTTCAGGTTCCATACGGGTACCATCATATGGTTCCGGGTTCGGGTCAAATATATGGGAATGGGCCAGGGATAAGGCATTTGACACCGGAGCATCCTTACAGTCCCTCAGCTGCGGTGGTTCATAGCGGTATGAATCAGCATTTGTATCAGGCGGCGGCACCAAACTCCGGTGCGGTTCCAATTTATTCGGGAATGACAATGAGAGGTGATGAACAAAATGAAGGTGGAGCAGAATTTGACGGGTCGGGGCACCAGCTTGTTAAATGA 1281 0.5098 MTSHHLPEFDTDSVTSSPRSDHFHEPPPRVRFMCSFGGKILPRPHDNQLRYVGGDTRIVAIHRSISFSALLLKLFKLSGMTNITVKYQLPNEDLDALISVTTDEDVENMMDEYDRVARNQNSRSVRLRLFLFPETEPEPSRTNSISSLLNGSANRENWFLDALNGGVSGALERGRSEASSMLSEVPDYLFGLDHNSDETQQQREPRPNNRPVLQDNVSNSDPGSPAPIVSSPFCSSSSAPSIPNLPPVKTKLSNSFTESRGSQVEAETGGQVNPNTYPVNQVVHYAPDAAYSGHSVQTIPVYYYPGPVQPGTVPVQPVPMQAPYPYVQQQPYHHAVGPVQVPYGYHHMVPGSGQIYGNGPGIRHLTPEHPYSPSAAVVHSGMNQHLYQAAAPNSGAVPIYSGMTMRGDEQNEGGAEFDGSGHQLVK* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0596 426 PANTHER OS05G0427100 PROTEIN-RELATED 1 415 - -
Lan18g0596 426 SUPERFAMILY CAD & PB1 domains 45 138 - -
Lan18g0596 426 MobiDBLite consensus disorder prediction 205 275 - -
Lan18g0596 426 Gene3D - 50 132 - -
Lan18g0596 426 CDD PB1_UP2 33 132 - -
Lan18g0596 426 MobiDBLite consensus disorder prediction 1 26 - -
Lan18g0596 426 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 415 - -
Lan18g0596 426 Pfam PB1 domain 45 133 IPR000270 GO:0005515
Lan18g0596 426 MobiDBLite consensus disorder prediction 190 275 - -
Lan18g0596 426 SMART PB1_new 44 134 IPR000270 GO:0005515
Lan18g0596 426 MobiDBLite consensus disorder prediction 406 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0596 Lan-Chr18 10971718 10973391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0596 19 167 MAP Kinase Kinase Kinase AT3G46920 40.940 2.30e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0596 - - aprc:113858359 532.332