Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0593 ATGGGCGAAGAAGACTTCACCGGAGAATCTAAACCCTTTCACAGCTCGCCAGAACAACCCACCGGAATCTCCAACCTCCGGCAAACCATCGAGTTCATCTCCTCTTTGATCCCCCTCTCTCACTCCGTCCGTGTCTTCGCCGGAAAATGGCAACACATTCGTAACAAACTGGAGGAGCTTTACTCCGGCCTCATCGCCGCCGAGAACTTCGATTCCGGCGAGAATCCATCACTCTCCGGCGTGGTCCTTTCGATATTGGCTACAACAAGCGAGTGCTACGATCTCGCGAAACGGTGCGTCGATCATTCTTACAGTGGGAAGCTTCTTATGCAGAGTGATTTGGATGTGATTTTTGCAAAGTTTGATAACCATGTTAAGAAGCTAACTGAGATTTACAAGAAGGGTATTTGGTCAAATGGGTATGCACTTGTTGTGTCAAAACCGAATCTTGGTGCTTCTAAAGAGGATATGAGGTTTTACATAAGGGACTTGTTGAGTAGAATGAAGATTGGTGATTTGGGTATGAAGAAGCAAGCTTTGATAAATCTTTATGATGTTGTCGTTGAGGATGAGAAGTATGTTAAAGTGATTGTTGATGTGGGTGATGTTGTTCATGTTTTGGTGGGGTTTTTAAGTTCCAATGAGGTGGGAATTCAAGAAGAGAGTGCTAAGGTTGTTTCTGTTATTGCGGGTTTCGATTCATATAAAGGGATTTTGGTTGCTGCTGGGGTTATTGCTCCTTTGGTGAGGGTTTTGGATTGTGGGAGTGAGGCAGGGAAGGTTGGTGCTGCGAGTTGTTTGATGAAATTGACTGAGAATTCGGATAATGCTTGGTGTATTTCGGCTCATGGAGGTGTCACTGCTTTGCTGAGGATTTGTGGTGAAGATTGTAAAAGGGATTTGGTTGGTTTTGCTTGTGGGGTGTTGAGGAATCTTGTTGGTGTCGAAGAGATAAAGAGGTTTATGGTTGAGGAGAGTGTTGTGTCCACTTTTATTAGGCTTCTGAGGTCCAATGAGGAAGTAATTCTGGTGAATTCAATAGGGTTCATTCAGACTATTAGCTATGGTGATGAGCTGGTTCGGGAAATGGTGATTAGAGAAGGTGGAAGTCGTGCTTTGTTGAGTGTATTGGAACCTAAATTGAGTTATTCTTCTAAGACAAGGGAGATAGCAATAAGGGCTATTGAGAATTTGTGTTTTTCTTCATCCACTTGTGTAAGTATTTTGATGAGTTATGGTTTTGTCGATCAGCTGTTATATTATGTTAGAAATGGTGAAGTTTCAATGCAAGAGTTGGCTCTGAAAGTGGCTTTTAGATTGTGTGGAACATCAGAGGAGGCTAAGAAAGCAATGGGTGATGCCGGCTTTATGGCTGACCTTGTTAAGTTTCTAAATGCAAAATCATTTGAAGTTCGAGAAATGGCAGCCGAAGCACTCTCTGGCATGGTTATGGTACCTAAAAATAGAAAGAGATTTGTGCAAGATGACCATAATATTGCCCTTATTCTGCAATTGCTTGACCCAGAGGAGGGAAATTCAGGTAACAACAAGTTCTTAATCTCTATCTTAATGTCATTAACAAATTGCACCAGTGGGAGGAAAAAGATTGTTAGTTCTAGTTATGCCAAAAACATAGAAAAACTTGCAGAGGCTGAAGTTTCTTCTGATGCCAAGAGACTTGTAAAGAAGCTAACCGCAAACCGGTTCCGCAGTATGCTGAGTGGAATCTGGCACTCGTGA 1740 0.4253 MGEEDFTGESKPFHSSPEQPTGISNLRQTIEFISSLIPLSHSVRVFAGKWQHIRNKLEELYSGLIAAENFDSGENPSLSGVVLSILATTSECYDLAKRCVDHSYSGKLLMQSDLDVIFAKFDNHVKKLTEIYKKGIWSNGYALVVSKPNLGASKEDMRFYIRDLLSRMKIGDLGMKKQALINLYDVVVEDEKYVKVIVDVGDVVHVLVGFLSSNEVGIQEESAKVVSVIAGFDSYKGILVAAGVIAPLVRVLDCGSEAGKVGAASCLMKLTENSDNAWCISAHGGVTALLRICGEDCKRDLVGFACGVLRNLVGVEEIKRFMVEESVVSTFIRLLRSNEEVILVNSIGFIQTISYGDELVREMVIREGGSRALLSVLEPKLSYSSKTREIAIRAIENLCFSSSTCVSILMSYGFVDQLLYYVRNGEVSMQELALKVAFRLCGTSEEAKKAMGDAGFMADLVKFLNAKSFEVREMAAEALSGMVMVPKNRKRFVQDDHNIALILQLLDPEEGNSGNNKFLISILMSLTNCTSGRKKIVSSSYAKNIEKLAEAEVSSDAKRLVKKLTANRFRSMLSGIWHS* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0593 579 SMART arm_5 190 231 IPR000225 GO:0005515
Lan18g0593 579 SMART arm_5 273 314 IPR000225 GO:0005515
Lan18g0593 579 SMART arm_5 232 272 IPR000225 GO:0005515
Lan18g0593 579 SMART arm_5 357 400 IPR000225 GO:0005515
Lan18g0593 579 SMART arm_5 315 355 IPR000225 GO:0005515
Lan18g0593 579 SMART arm_5 444 484 IPR000225 GO:0005515
Lan18g0593 579 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 579 - -
Lan18g0593 579 Gene3D - 160 568 IPR011989 -
Lan18g0593 579 SUPERFAMILY ARM repeat 161 537 IPR016024 -
Lan18g0593 579 MobiDBLite consensus disorder prediction 1 21 - -
Lan18g0593 579 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0593 Lan-Chr18 10896210 10898486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0593 161 449 U-box Gene Family AT3G46510 24.221 4.04e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0593 - - gmx:100809382 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0593 18 10896210 10898486 Lan19g0977 19 17183790 17185968 PCT
Lan18g0593 18 10896210 10898486 Lan16g0110 16 857661 859796 PCT
Lan19g0977 19 17183790 17185968 Lan18g0593 18 10896210 10898486 PCT
Lan16g0110 16 857661 859796 Lan18g0593 18 10896210 10898486 PCT