Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0572 ATGATTCAAACTCAGGAAGTGAAGATGCGGGAGAAACAAGAAGACGATGATGGCCCACCACCAGGGTGGCAACAACCTATCCATACTACGACGCCGTCACTTCCAACGCCGCCGCCGCCGCGTCCATCTGGTGATAATATGGGTCAATTGGTTTGTGGTTCTTGCCGTCGCCTGCTTGCATATCCGGGAGGTTTCAAGCATGTTACATGTGCTTGCTGTGGGACAGAGAATCTTGTATTACAACCTCATCAGGTTGGACAAGTTAAGTGTGGGGGCTGTGCAGTATTACTAATGTATCCGTATGGTGCTCCAAGAGTTAGGTGCTGCTCATGCCGATTTGAGACAGAGATTGGGGATCATAACAAGCGCCCTCCACTGTCTGAACAACTACGGAAACCAACTCCTCCCAAAGGGATGTAG 420 0.5024 MIQTQEVKMREKQEDDDGPPPGWQQPIHTTTPSLPTPPPPRPSGDNMGQLVCGSCRRLLAYPGGFKHVTCACCGTENLVLQPHQVGQVKCGGCAVLLMYPYGAPRVRCCSCRFETEIGDHNKRPPLSEQLRKPTPPKGM* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0572 139 PANTHER PROTEIN LSD1 8 135 IPR040319 -
Lan18g0572 139 MobiDBLite consensus disorder prediction 120 139 - -
Lan18g0572 139 Pfam LSD1 zinc finger 90 112 IPR005735 -
Lan18g0572 139 Pfam LSD1 zinc finger 52 75 IPR005735 -
Lan18g0572 139 PANTHER PROTEIN LOL2 8 135 - -
Lan18g0572 139 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 49 79 IPR005735 -
Lan18g0572 139 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 87 112 IPR005735 -
Lan18g0572 139 MobiDBLite consensus disorder prediction 1 47 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Lan18g0572 zf-LSD1 8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0572 - - lang:109332265 288.5