Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0551 ATGGAGGGTGATGATGTTTCAGAGGGAGACATTAATCACAAAAGGGGCGGCTCAGATGAGAACAGTAATGAGAATAATAATGGAAGCCATAGCAAATTTGCGAATTCCAATGAAGGACAGAGCAAACCTAAGCGCCAGATGAAAACCCCGTTTCAGCTTGAAACCCTAGAGAAAGCTTATGCCATGGAGACTTATCCTACGGAGAAGATTAGGTTGGAGCTGTCAGAGAAATTGGGGTTGACGGATCGGCAGTTGCAGATGTGGTTTTGCCACAGGCGGTTGAAGGATAAGAAGGATTTGGCGCCAAAAAAACCATCGCGGAATGTGGTGGAGCCTTCACCGGAGCCCTTTGCAGAAGACCTGGGGTTGGAGCCTGAGTCTGGTAATGATTATGGATCAAGGTCAGGTTCGGGTTCAAGCCCGTTTACCCCATCAGAGTTTCGGAGTGTGGTGCCCCAGACCGGTTATTATGAGTCTCCGCAGGCTGTATTGGAGCTTAGAGCAATTGCTTGTGTTGAGGGACAGTTAGGGGAGCCCTTGAGAGAAGATGGACCCATTTTAGGAGTAGAGTTTGATCCATTGCCACCAGATGCATTTGGGGCACACATAGCTGTTACAGAACAGAAGCGGCCTACTCTTGGCTATGACAGTCAAATGTATGAAAAACATGATGTCCGAACAAATAAGGCTATGGCAAGGACATTTCATGAATATCAATATCCACCAAAACAACCTAGCATCAGGTCTGATGCTTTTGGACAATATAGCCACCAACATCATTTACATGATCCAATGGAGGGTCCTGCCCGAACTCCCTCTTTTGCACATGGAGATGAACAGGTACCTAGAATTCATGCTACCCATGGTCCTCATGTTCGTCTTCCGTCTCAACCAGACAAAGAAGTTATTACCTATCCGTCTCCTCCCCAAGAAAACAATGTTACCCCACAACGGGAATCTTTCACAAACCTGGATAGTGGCGTAACGATCACTCACTATACTGATCACCAAATCGCTGACCCAGAAAGTTCACATGCTGTATCTGATGTACAAAATTTCCATGACAATGCAATGCGAATCGAGAGGAAGCGAAAGAGTGATGATGCCAGAAGTGCAAGGGACGTTGAAGCCCATGAGATGAGGATCCGGAAAGAGCTTGAGAAACAAGATAACCTTAGACGAAAGAGTGAAGAGCGAATTAGGAAAGAAATGGAGAGACAAGATCGTGAACGAAAGAAGGAAGAAGAGAGGTTGATGCGTGAGAGACAGCGAGAAGAGGAAAGAACAAAGCGTGAGCAAAAACGTGAAATTGAAAGACGGGAAAAGTATTTGCTTAAAGAAAATTTAAAAGCCGAGAAAATGAGGCAAAAAGAAGAGCTTCGGAAAGAGAAAGAAGCAGAGAGAAGGAAAGCTGCCCTTGAGAAGGCAACTGCTCGTAGACTTGCTAGGGAATCTATGGAACTTATTGAGGATGAACAGCTGGAATTGATGGAGTTGGCAGCTTCAAACAAGGGAATTTCCTCTATTATCCATCTTGATCTTCAGACTTTGCAAAACCTTGAATCATTTAGGGATTCATTGAGTGCTTTCCCACCCAAAAGTGTAAAGGTAAAAAACCCATTTGCTGTACAACCCTGGATCGACTCAGAAGAGAATGTTGGCAACCTTCTCATGGCGTGGAGATTTTTTATTGCTTTTGCTGATGTTCTTGAATTATGGCCATTTACTCTTGATGAGTTCGTGCAAGCATTTCATGACTATGATTCAAGATTGTTGGGTGAGATACACATTGCTCTTCTTAAGGTTATAATAAAAGACATTGAAGATGTCTCAAGGACACCTACAGGATTAGGAATGAACCAAATTGGTACTGCTAATTCTGGAGGTGGCCATCCAGAAATTGTGGAAGGGGCATATGCATGGGGCTTTGACATACGAAATTGGCATAAGCACTTAAACCAGTTGACATGGCCAGAAATTTTCCGACAGCTGGCATTATCTGCAGGATATGGACCACAGTTGAAGAAAGGAAGTCTTACATGGCCGTGTGCAAATGATAAAGATGAGGGCAAAAGTATTGAGGATATCATTTCCACACTTCGTAATGGTTCAGCAGCAGAAAATGCAGTGGCAAAAATGCGGCATAGAGGTCTATTAGCACCTCGAAAATCTAGGCACCGGTTAACTCCTGGAACAGTCAAGTTTGCCGCATTTCATGTTCTCTCACTTGAGGGTAGCAAGGGACTTAATGTGCTAGAGCTTGCAGAAAAAATCCAGAAATCTGGTCTTCGAGACCTGACGACTAGCAAGACACCTGAGGCATCAATTTCTGTTGCTTTGACAAGAGATACTAAACTCTTTGAAAGAGTAGCTCCATCAACATATCGTGTGCGTTCTACCTTTAGAAAGGATCCTGTTCATGCTGAGTCCATTCTTTCAGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTGTCGCTGGTGAAGGTGCTGATGATGTTGAAAGAGAAGAAGATTCAGAAAGTGATGAAGTTGATGAGGACCCTGAAGTTGATGATTTGGTAAATCCTGCAAGCGCTAAGAGAACATCTGATCAAAGTGCTGATTTCTCATCTAATGGAAATGAAAATTTGGGTCATAATGTAGAACTTATTCAAGATGAGTTTCATAAGGACCTGCCTTGTTTTCCAGAGAGTGTTTCCAGGAATGCTGATTGTCCAGTTGCTGTTGTGGGACAACCTGCTGCTTTTGAGGATCTGAATGCTGGAAATGTTGAAGAAAATACGGAAATTGATGAAAGCAAGTGTGGAGAGTCATGGGTTCAAGGTCTCACAGAAGGAGAATATTCTGATCTCTGTGTCGAGGAGCGTCTAAATGCTCTTGTTGTACTGGTTGGTATGGCAAATGAAGGAAATTCAATCCGTGTTGTTCTTGAGGACCGTTTGGAAGCAGCAAATGCTTTGAAAAAGCAAATGTGGGCAGAAGCTCAGATAGATAAAGTTCGCTCGAAAGATGATTATCATAGTAAATCAGATTTTCCATCAATCAATGGGAATACAGTTGAAACTCAATTCACATGTCCTGCTGTGGAGGGCAACCAAAGCCCGTTGCTTGACATTAATATTGACAATAATAATAATGAGGCATTGTCCCTCACTCCAGAAAATCAAAAGGCGACTCCTGCTGCACAGATCTTGTCTTTTCAGCCCTTGTTAATTCAAGATCCTTGCACAAGTCAAGATAATCCTCAGGCTCAGCTATCTTTGCAATATTCGAAAAGGTCACGTTCTCAGTTGAAATCTTATATTTCCCACATAGCAGAGGAGATGTATGTCTATAGGTCCTTACCTCTGGGCCAAGATCGCAGACGTAATCGGTATTGGCAGTTTGTTGCATGTGCTTCTTGCAATGATCCTGGTGCTGGCAGGATCTTTGTTGAATATCTTAATGGCAAATGGAGGCTTATTGATTCTGAAGAGGCCTTTGATGCACTTTTGAATTCATTGGATTCACGTGGGATCAGGGAATCTCATTTGCGCATAATGTTGCAAAAGATTGAGAACTCCTTCAAAGAAAATGTTCGAAAAAATACACACGTTAAAGTTGGAAGCATAGGTGAAACTTCTATTAAAAATGAAGCGGATGAAACAGATTTAAGTCCTGATCGTCATACTGGGTTTGACAGTCCTAGCAGTACTCTTTGTGGCTTGAACACTGATACTTCAGAAACTTCTTTGTCCTTCAAAATTGAGCTTGGAAAAAGTGAGAGCGAGAAGAAAGCTGCCTTGAAAAGGTATCAAGATTTCCAAAAATGGATGTGGAGAGAATGCTATAAATCACCAATATTGAGTGCAATGAAAAGTGGTAAAAAGAGATGCAAACCTCAGGTGGACATCTGTGATATCTGTCTCAACCCTTATTTCTTTGAAGACTCCCATTGCAATTGTTGCCACCAACCTTTTCCAATACATAATGGATTTAATTTTTCTAAGCACTCATTTCAATGTGGAGATGAGTTGTCCAAAGATATTTGTATTTTGGATTCTTCTCTTCCCTTGCAGACGAGATTGCTGAAGGCCCTGCTGGCTTATATTGAGGCATGTGTTCCGCCCAAGGCACTTAATTCAACTTGGACAGAAGATATTAGGAGGCGGTGGGGTTTGAAGTTGAGCAAATCAAATTCTGTTGAGGAACTTTTACAGATACTGACCCTATTTGAGAGAGCATTGCAGCGAAATTTTCTATCTTCAAACTACTCTACAACGGAAGAGTTGTTGGGATCAAGCAGCCTGTCACAGAGTGCTGGAGATGCTTCTGCTGATCCCGAATCGGTTGCTTTACTTCCATGGGTTCCACAGACCACTCCAGCTGTGTGTCTCAGACTTTTTGAGTTTGATGCATCCATTAGCTACATACTGGTTGAGAAACCTGAGTCTTTTCTGGAAAAGGAGGCTAGAGAATACATGAAGCTTCCTTCAAGATATAGTCCTTTCAAATCTGGCAGAGTGGTTGAACCATCAGATTTGGATCATGATGAATTCATGAAAGTTAAATCTGCTCATATGAAAATTGTACAAAGTGGCAATAAACGTGGACGAGGGACTCATGACAAAGGACGGGGTAAAAAGCAATCTAAAGGAATGCATCATTCAAAACAAGATACTGGCCTACATACTGTTAACGTAACCGAGAATCTAAGTCAAAGATTAAAACAGCAGGGACGAGGGTCACAAGGAAAAGGCGGTGGGCGTGGCCGCCGAACAGTCAGGAAAAGGAGAGTGGAAAAGAGGGCAGTTGAAGATTTGTTGTTGAGCCCTAGGGATACTACCTCTCAGAGCTCCAAGATTGGTAGAGAACCATTGAGAAACATATATGAGGAATGGGTTGATGATGATGAAAAGAGAAGTTCCATGAGTCCCATCCACATTGGTCTTTCTGCTGATGTTAGTAACAGCACTGAAGATGTTGAATCTGATGAGAATGTTGAAGCAGTGGAATCTGATGACAATGGCCAAGCAGTGGAATATGATCAAGGAAACTGGGAGATAGGTTTTAATGGTAACCCAAGCAGATGGAGCAGAGATTTGGTTGGAATGAGTGATGAAGATATGGAAGCTTCTGAAGATGGCAATAATGTTATTGAAGATGATGATGATGATTCAGAGGCAGATATTATGAGTGAAGATTCAGATGGTGTGGCTAATGGAGTTGTAAATGTACAAGGTTCAGACTCCTCTGAGTCTGAACAATCTTCTGATTAG 5265 0.4234 MEGDDVSEGDINHKRGGSDENSNENNNGSHSKFANSNEGQSKPKRQMKTPFQLETLEKAYAMETYPTEKIRLELSEKLGLTDRQLQMWFCHRRLKDKKDLAPKKPSRNVVEPSPEPFAEDLGLEPESGNDYGSRSGSGSSPFTPSEFRSVVPQTGYYESPQAVLELRAIACVEGQLGEPLREDGPILGVEFDPLPPDAFGAHIAVTEQKRPTLGYDSQMYEKHDVRTNKAMARTFHEYQYPPKQPSIRSDAFGQYSHQHHLHDPMEGPARTPSFAHGDEQVPRIHATHGPHVRLPSQPDKEVITYPSPPQENNVTPQRESFTNLDSGVTITHYTDHQIADPESSHAVSDVQNFHDNAMRIERKRKSDDARSARDVEAHEMRIRKELEKQDNLRRKSEERIRKEMERQDRERKKEEERLMRERQREEERTKREQKREIERREKYLLKENLKAEKMRQKEELRKEKEAERRKAALEKATARRLARESMELIEDEQLELMELAASNKGISSIIHLDLQTLQNLESFRDSLSAFPPKSVKVKNPFAVQPWIDSEENVGNLLMAWRFFIAFADVLELWPFTLDEFVQAFHDYDSRLLGEIHIALLKVIIKDIEDVSRTPTGLGMNQIGTANSGGGHPEIVEGAYAWGFDIRNWHKHLNQLTWPEIFRQLALSAGYGPQLKKGSLTWPCANDKDEGKSIEDIISTLRNGSAAENAVAKMRHRGLLAPRKSRHRLTPGTVKFAAFHVLSLEGSKGLNVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERVAPSTYRVRSTFRKDPVHAESILSEARKKIQIFENGFVAGEGADDVEREEDSESDEVDEDPEVDDLVNPASAKRTSDQSADFSSNGNENLGHNVELIQDEFHKDLPCFPESVSRNADCPVAVVGQPAAFEDLNAGNVEENTEIDESKCGESWVQGLTEGEYSDLCVEERLNALVVLVGMANEGNSIRVVLEDRLEAANALKKQMWAEAQIDKVRSKDDYHSKSDFPSINGNTVETQFTCPAVEGNQSPLLDINIDNNNNEALSLTPENQKATPAAQILSFQPLLIQDPCTSQDNPQAQLSLQYSKRSRSQLKSYISHIAEEMYVYRSLPLGQDRRRNRYWQFVACASCNDPGAGRIFVEYLNGKWRLIDSEEAFDALLNSLDSRGIRESHLRIMLQKIENSFKENVRKNTHVKVGSIGETSIKNEADETDLSPDRHTGFDSPSSTLCGLNTDTSETSLSFKIELGKSESEKKAALKRYQDFQKWMWRECYKSPILSAMKSGKKRCKPQVDICDICLNPYFFEDSHCNCCHQPFPIHNGFNFSKHSFQCGDELSKDICILDSSLPLQTRLLKALLAYIEACVPPKALNSTWTEDIRRRWGLKLSKSNSVEELLQILTLFERALQRNFLSSNYSTTEELLGSSSLSQSAGDASADPESVALLPWVPQTTPAVCLRLFEFDASISYILVEKPESFLEKEAREYMKLPSRYSPFKSGRVVEPSDLDHDEFMKVKSAHMKIVQSGNKRGRGTHDKGRGKKQSKGMHHSKQDTGLHTVNVTENLSQRLKQQGRGSQGKGGGRGRRTVRKRRVEKRAVEDLLLSPRDTTSQSSKIGREPLRNIYEEWVDDDEKRSSMSPIHIGLSADVSNSTEDVESDENVEAVESDDNGQAVEYDQGNWEIGFNGNPSRWSRDLVGMSDEDMEASEDGNNVIEDDDDDSEADIMSEDSDGVANGVVNVQGSDSSESEQSSD* 1755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0551 1754 MobiDBLite consensus disorder prediction 1529 1600 - -
Lan18g0551 1754 CDD homeodomain 44 98 IPR001356 GO:0003677
Lan18g0551 1754 SUPERFAMILY Homeodomain-like 28 98 IPR009057 -
Lan18g0551 1754 Coils Coil 375 440 - -
Lan18g0551 1754 Pfam DDT domain 551 606 IPR018501 -
Lan18g0551 1754 MobiDBLite consensus disorder prediction 1735 1754 - -
Lan18g0551 1754 ProSiteProfiles 'Homeobox' domain profile. 39 99 IPR001356 GO:0003677
Lan18g0551 1754 MobiDBLite consensus disorder prediction 1650 1754 - -
Lan18g0551 1754 Pfam HB1, ASXL, restriction endonuclease HTH domain 731 799 IPR007759 GO:0006355
Lan18g0551 1754 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 11 1754 IPR044977 GO:0006357
Lan18g0551 1754 MobiDBLite consensus disorder prediction 830 878 - -
Lan18g0551 1754 Coils Coil 446 477 - -
Lan18g0551 1754 MobiDBLite consensus disorder prediction 1703 1728 - -
Lan18g0551 1754 MobiDBLite consensus disorder prediction 860 878 - -
Lan18g0551 1754 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 939 980 IPR028942 -
Lan18g0551 1754 ProSiteProfiles HARE-type HTH domain profile. 731 800 IPR007759 GO:0006355
Lan18g0551 1754 MobiDBLite consensus disorder prediction 130 147 - -
Lan18g0551 1754 MobiDBLite consensus disorder prediction 1 20 - -
Lan18g0551 1754 SMART HOX_1 41 103 IPR001356 GO:0003677
Lan18g0551 1754 MobiDBLite consensus disorder prediction 1555 1576 - -
Lan18g0551 1754 Pfam Homeodomain 42 98 IPR001356 GO:0003677
Lan18g0551 1754 Gene3D - 25 100 - -
Lan18g0551 1754 MobiDBLite consensus disorder prediction 21 48 - -
Lan18g0551 1754 PANTHER HOMEOBOX DOMAIN PROTEIN 11 1754 - -
Lan18g0551 1754 MobiDBLite consensus disorder prediction 100 147 - -
Lan18g0551 1754 ProSiteProfiles DDT domain profile. 550 609 IPR018501 -
Lan18g0551 1754 MobiDBLite consensus disorder prediction 1 53 - -
Lan18g0551 1754 SMART testlast3 550 609 IPR018501 -
Lan18g0551 1754 MobiDBLite consensus disorder prediction 360 435 - -
Lan18g0551 1754 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1115 1187 IPR028941 -
Lan18g0551 1754 MobiDBLite consensus disorder prediction 833 854 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0551 Lan-Chr18 10379495 10390258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0551 34 1740 Homeobox Transcription Factor Family AT1G28420 47.255 0.0 1292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lan18g0551 WSD 7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0551 - - gmx:100818817 2289.61