Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0550 ATGGCTTCCAAAAATGGTTACAAATCAAATGAGCTATTTCAAGCTCAAGCTCACTTGTACAAACACATCCAAAGCCATTTAATGATCATGTCAATAAAATGGGCTGTTGAACTTGGCATACCAGATATCATCAAAAACCAAACCCAACCCATTACTCTTCCTCAGCTTATTTCAGCTCTTCAAGTTCCACAATCAAAAACTACTTGTGTTCAACGCCTCATGCGCTTATTAGCACACAATAACTTATTTGTTATCACTAAAAAAATAGATAGCAACAATGAAGCCACAGAAGCTTATGGTCTTACCCCTTCGTCAGAGCTTCTTGTTAAAGGCACTGACCATAGTTTATCATCAATGGTTGAGTTTATCACAAACCCAACACTTGTTGATATGTTTCATCATTTGGGAAAATGGACATTTTCGGAAGAGCTTACACTCACTGAGGTTGCGTTAGGGTCAGGAGGGTATTGGAAATTTTTGCAGCAAAATCCTGGTCATTTGAAACGCTACAATGAGGCAATGGAAAGTGATTCACACTTAATAAGGTCGGCATTGAAGGATTGCCAACCTGTTTTTGAGGGCTTGGACTCGTTGGTTGATGTTGGTGGTGGAACTGGAACCATGGCTAAGATCATCTGTGAAGCATTTCCTAAGCTGAAATACATTGTGTTGGACCTTCCTCAAGTTGTTACAGGCCTAACAGGAAGCAATAACTTGAGTTTTGTTGGTGGCAACATGTTCGAATATGTCCCTCAAGCTGATGCAATTTTAATCAAGTGGGTTTTACACAATTGGAATGACGAAGACTGCATAAAGATACTGAAAAATTGTAAAGAAGCTATTTCAGGCAAAGAGAAACAAGGAAAAGTGATCATAATAGATATTGTGATAAATACAAAGCAAGATGAACATGACATGACAGAACTTAAGCTCTTCCTTGACATAGCAATGATGACTGTTCACAATGGAAAGGAGAGAGATGAAAATGAATGGAAGGGAATCTTCAAAAAGGCAGGGTTTGAACACTGCAAGATATTTCCCATATTTGGCTTCAGATCTCTTATTGAACTCTATCCTTAA 1080 0.3833 MASKNGYKSNELFQAQAHLYKHIQSHLMIMSIKWAVELGIPDIIKNQTQPITLPQLISALQVPQSKTTCVQRLMRLLAHNNLFVITKKIDSNNEATEAYGLTPSSELLVKGTDHSLSSMVEFITNPTLVDMFHHLGKWTFSEELTLTEVALGSGGYWKFLQQNPGHLKRYNEAMESDSHLIRSALKDCQPVFEGLDSLVDVGGGTGTMAKIICEAFPKLKYIVLDLPQVVTGLTGSNNLSFVGGNMFEYVPQADAILIKWVLHNWNDEDCIKILKNCKEAISGKEKQGKVIIIDIVINTKQDEHDMTELKLFLDIAMMTVHNGKERDENEWKGIFKKAGFEHCKIFPIFGFRSLIELYP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0550 359 Pfam O-methyltransferase domain 146 341 IPR001077 GO:0008171
Lan18g0550 359 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Lan18g0550 359 Gene3D Vaccinia Virus protein VP39 109 359 IPR029063 -
Lan18g0550 359 Gene3D - 1 108 IPR036388 -
Lan18g0550 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Lan18g0550 359 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 358 - -
Lan18g0550 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 357 IPR029063 -
Lan18g0550 359 PANTHER O-METHYLTRANSFERASE 2 358 IPR016461 GO:0008168
Lan18g0550 359 SUPERFAMILY "Winged helix" DNA-binding domain 9 112 IPR036390 -
Lan18g0550 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 359 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0550 Lan-Chr18 10355051 10356951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0550 24 357 Monolignol Biosynthesis Gene Families AT5G54160 30.678 1.01e-45 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0550 K22588 K13262 gmx:100818947 423.32