Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0548 ATGCTTCCAATATTATTCCTCTTCCTTCTTTCCATTCTCTCTTCACCACTCACCATTCTCTCTCTAAACCAAGAAGGCCTCTCCCTCTACCAATTCAAACTCCTTCTCCAAGACCCTGACTCTCGCCTCTCCTCTTGGAACCCCCTCGACCCCACCCCATGCAACTGGTACGGTGTCACCTGCGCCACCGCCACCGCCACCACCGTCACCACCCTCGACCTCTCCAACACAAACATAGCAGGCCCATTCCCCACCACCATCCTCTGCCGCCTCCCTAACCTCACCTCCATCACTCTCTTCAACAACTCCATCGATCAAACACTCTCCTCCGACATCAACCTATGTTACAACCTCGTCCACCTCGACCTCTCACAAAACCTCTTAACCGGTCCTCTCCCTTCCACCCTCCCGCAACTCCACAACCTCCGCTACCTCGACCTCACCGGTAATAACTTCTCCGGTCCCATACCGGAGACTTTTGGAACATTCCAGAAACTTGAAGTTATTTCGTTAGTTTATAATCTTCTAGATGGTACTATACCTCCTTCGCTTGGAAACATTACCACTCTTAAAATGTTGAACCTTTCTTACAACCCGTTTTTTCCGGGTCGGATCCCACCCGAACTTGGAAACTTAACGAACCTTCAAGTTCTTTGGTTAACCCAATGCAACCTCGTTGGGCTCATTCCTGATTCGCTTGGGAACTTGAAAAAGCTTCAAGACTTGGACCTTGCGTTGAATGATCTATATGGTTCTATACCGAGTTCGCTCACTGAGTTAACCAGTTTGAAACAGCTCGAGTTGTATAATAACTCGCTCTCCGGCGAGTTGCCACGTGGAATGGGGAACCTTAGTTCTTTGAGGCTTCTCGATGCGTCGATGAACCACTTGACCGGGAAAATTCCCGACGATTTGTGTTCATTGCCGCTCGAGAGCTTCAATCTCTATGAGAATCGCTTCGACGGTGAGTTACCGGCGAGTATTGCAAACTCGCCGAATCTATATGAGCTTAGGTTGTTTGGGAATAGGCTCACCGGAAAGTTGCCGGAGAGATTGGGAAAGCATTCACCTCTGAGGTGGCTTGACGTTTCGAGTAACCAGTTCTATGGTCCTATTCCGGCGACTCTATGTGATTTCGGAGTATTGGAGGAGCTTCTGGTGATATATAACCTTTTCTCCGGCGAGATTCCGTCGAGTTTGGGAAGTTGCCAGAGCTTGATGCGTGTCAGGCTTGGTTACAATAGATTTTCCGGCGAGGTTCCCTCGGGGGTTTGGGGTCTTCCACATGTGTATCTTCTTGAGCTTGCTGAGAACTCATTTTCGGGTTCCATTTCGAAAACGATCGCCGGTGCAGCGAACTTGTCTTTGTTGTTCTTGTCTAAGAACAACTTCAGTGGACAGATTCCTGATGAGGTTGGATGGTTGGAAGGTCTTGTGGAACTTTCTGGAAGCGATAACATGTTCAGTGGTTCACTTCCTGAGAGTGTTGTGAATCTTCGGCAGCTTGGGATCCTTGATCTTCACAATAACAAGCTCTCTGGGGAACTTCCTAAAAGAATACATTTGTGGAAGAAGCTCAATGAGTTGAATTTGGCCAACAATGAAATTTCTGGGAAGGTTCCTGATGGGATTGGAAGTTTATCTGTTCTTAATTTTCTTGACCTTTCGAATAACAAATTTTCAGGGAATGTCCCTCTTGGGTTGCAGAATATGAAGCTGAATCAGCTTAATTTGTCTTATAACCATTTTTCCGGGGAACTTCCCCCTCTTTTGGCTAAAGATATGTATAGGACTAGTTTTCTGGGTAATCCTGGTTTGTGTGGTGATTTGAGAGGTGTGTGTGATGGTAGGAGTGAAGAAAAGAGTGTAGGTTATGTTTGGTTGCTTAGGATTATTTTTGTTGCTGCCATTTTGGTGTTCTTTGTTGGTGTTGTGTGGTTCTATTTCAAGTATAAAAGTTTCAAGGATGCAAGGGCTATTGACAAATCAAGATGGACATTGATGTCATTTCATAAACTGGGTTTTGGCGAAGATGAGATTTTGAATTGCCTCGATGAAGATAATGTGATCGGAAGTGGGGCTTCTGGTAAGGTGTATAAGGTTGTGCTCGGCAATGGGGAGGCTGTTGCGGTGAAGAAGATATGGGGCAGGGTCAAGAAGGAAGTAGAAAGTGGAGATCTTGAAAAGGGTGGTAGGGTTGAAGACAATTCTTTTGAAGCAGAGGTTGATACTTTGGGTAAGATTAGGCACAAGAACATTGTTAAGTTGTGGTGTTGCTGCACCACCAGGGACTGCAAGCTTTTGGTTTATGAATATATGCTTAATGGCAGTCTTGGTGATTTGCTTCATAGCAGCAAAGGAGGGTTGTTAGATTGGCCAACTAGATACAAGATTGCTGTTGATGCTGCCGAAGGCCTCTCTTATCTGCATCATGATTGTGTTCCCCCAATTGTTCATAGAGATGTGAAATCTAACAATATCTTGTTGGATGGGGACTTTGGTGCAAGGGTGGCAGATTTTGGAGTAGCCAAGGTAGTTGAAACCACAACGATAGGAACCAAATCCATGTCCGCCATAGCTGGGTCTTGTGGTTATATTGCACCAGAATATGCATACACGCTCAGAGTGAATGAGAAGAGTGACATATACAGTTTTGGTGTTGTTATACTTGAGTTGGTTACTGGAAGACGCCCAGTCGACCCTGAATTTGGGGAGAAAGACTTGGTTAAGTGGGTATGCACCACCTTGGATCAGAAAGGTCTGGACCATTTACTTGACTCTAGGCTTGATCTTTGTTTCAAAGAAGAAATTTGCAAGGTCTTCAACATTGGCCTCATGTGCACTAGTCCTCTTCCTATCAACCGGCCTTCGATGAGAAGGGTGGTGAAGATGTTGCAAGAGGTTAGCACAAAGAAACAAACGAAGCCCGCCAAGAAAGATGGAAAGTTATCACCTTACTACTATGATGATGCCTCAGATCATGGAAGTGTTGCTTAA 2997 0.4551 MLPILFLFLLSILSSPLTILSLNQEGLSLYQFKLLLQDPDSRLSSWNPLDPTPCNWYGVTCATATATTVTTLDLSNTNIAGPFPTTILCRLPNLTSITLFNNSIDQTLSSDINLCYNLVHLDLSQNLLTGPLPSTLPQLHNLRYLDLTGNNFSGPIPETFGTFQKLEVISLVYNLLDGTIPPSLGNITTLKMLNLSYNPFFPGRIPPELGNLTNLQVLWLTQCNLVGLIPDSLGNLKKLQDLDLALNDLYGSIPSSLTELTSLKQLELYNNSLSGELPRGMGNLSSLRLLDASMNHLTGKIPDDLCSLPLESFNLYENRFDGELPASIANSPNLYELRLFGNRLTGKLPERLGKHSPLRWLDVSSNQFYGPIPATLCDFGVLEELLVIYNLFSGEIPSSLGSCQSLMRVRLGYNRFSGEVPSGVWGLPHVYLLELAENSFSGSISKTIAGAANLSLLFLSKNNFSGQIPDEVGWLEGLVELSGSDNMFSGSLPESVVNLRQLGILDLHNNKLSGELPKRIHLWKKLNELNLANNEISGKVPDGIGSLSVLNFLDLSNNKFSGNVPLGLQNMKLNQLNLSYNHFSGELPPLLAKDMYRTSFLGNPGLCGDLRGVCDGRSEEKSVGYVWLLRIIFVAAILVFFVGVVWFYFKYKSFKDARAIDKSRWTLMSFHKLGFGEDEILNCLDEDNVIGSGASGKVYKVVLGNGEAVAVKKIWGRVKKEVESGDLEKGGRVEDNSFEAEVDTLGKIRHKNIVKLWCCCTTRDCKLLVYEYMLNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVETTTIGTKSMSAIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPVDPEFGEKDLVKWVCTTLDQKGLDHLLDSRLDLCFKEEICKVFNIGLMCTSPLPINRPSMRRVVKMLQEVSTKKQTKPAKKDGKLSPYYYDDASDHGSVA* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0548 998 PANTHER LRR RECEPTOR-LIKE KINASE 5 980 - -
Lan18g0548 998 Gene3D Transferase(Phosphotransferase) domain 1 773 992 - -
Lan18g0548 998 Pfam Protein kinase domain 686 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0548 998 SUPERFAMILY RNI-like 96 559 - -
Lan18g0548 998 SMART serkin_6 684 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0548 998 Gene3D Ribonuclease Inhibitor 22 180 IPR032675 -
Lan18g0548 998 ProSitePatterns Protein kinases ATP-binding region signature. 690 720 IPR017441 GO:0005524
Lan18g0548 998 MobiDBLite consensus disorder prediction 972 987 - -
Lan18g0548 998 Gene3D Phosphorylase Kinase; domain 1 669 772 - -
Lan18g0548 998 SMART LRR_typ_2 91 115 IPR003591 -
Lan18g0548 998 SMART LRR_typ_2 284 308 IPR003591 -
Lan18g0548 998 SMART LRR_typ_2 499 522 IPR003591 -
Lan18g0548 998 SMART LRR_typ_2 139 162 IPR003591 -
Lan18g0548 998 SMART LRR_typ_2 212 235 IPR003591 -
Lan18g0548 998 SMART LRR_typ_2 260 283 IPR003591 -
Lan18g0548 998 Gene3D Ribonuclease Inhibitor 181 251 IPR032675 -
Lan18g0548 998 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 980 - -
Lan18g0548 998 Pfam Leucine Rich Repeat 214 236 IPR001611 GO:0005515
Lan18g0548 998 Pfam Leucine Rich Repeat 141 161 IPR001611 GO:0005515
Lan18g0548 998 MobiDBLite consensus disorder prediction 968 998 - -
Lan18g0548 998 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Lan18g0548 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
Lan18g0548 998 Gene3D Ribonuclease Inhibitor 252 309 IPR032675 -
Lan18g0548 998 Gene3D Ribonuclease Inhibitor 330 616 IPR032675 -
Lan18g0548 998 SUPERFAMILY L domain-like 382 607 - -
Lan18g0548 998 SUPERFAMILY Protein kinase-like (PK-like) 680 965 IPR011009 -
Lan18g0548 998 ProSiteProfiles Protein kinase domain profile. 684 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0548 Lan-Chr18 10322440 10326475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0548 18 998 Receptor kinase-like Gene Family AT1G28440 69.807 0.0 1397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan18g0548 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0548 - - gmx:100819887 1685.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0548 18 10322440 10326475 Lan6g0739 6 6710710 6714406 LSH