Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0547 ATGTCATGGTGCAATGAGTCAGATGATGAAGAGAGGGGTATTAAACTAATGGCGCCTACTATTATTCCTAGAACTAGTAATAATAGTGTTGCTAATGAAACAAAACCAACGCAAATTAGAACCATAACTTGCCCCTCTTGTGGCTATAGCATTGAATTCCAAGATCAGGGTGGAATTCTTGATTTGCCTGGTTTACCAGCTGGGGTGAAGTTTGATCCAAATGATCATGAAATATTGGATCATTTGGAAGCAAAAGTGCTCTCTAATGTGCCAAAGCTTCATCCACTTATTAATGAGTTCATACCAACGCTTGAAGGAGAGAATGGAATCTGTTATACACACCCTGAAAAGCTTCCAGGAGTAAGCAAAGATGGACAAATCCGTCATTTCTTTCACAGGCCTTCTAAAGCATACACAACAGGAACAAGAAAAAGAAGAAAAGTTCACACTGATGAAGAGGGAATTGAAACAAGATGGCACAAAACAGGTAAAACTAGACCAATTTTTGTTGGTGGTGTAGTGAAGGGTTTCAAAAAGATACTAGTCCTATACACCAACTATGGAAGGCAAAAGAAGCCTGAGAAAACTAACTGGGTAATGCATCAATACCATCTTGGCACTAATGAAGAAGAGAAAGATGGAGAGTTAGTGGTTTCAAAGATTTTCTATCAAACACAGCCTAGACAATGCGGAAATTCAATCATAAAGGACCCATTTGAAAATCAAGGACTTGATCACCAAAGTGTGCATGATGACAATATAATGCATAAAAATAATGCAGCTCTTGGAGATTACTACAACCCTTCATTCATAAATTATGACCATGTTGAAAGCTCTCTTCAACTCATTCCAAACTTGGTTATGCAAGGTGCTAGCTCTTCTTTTATTCGATTAGCAACAATGGATGCAAACAAAGGAAGGTTGGACAGAAAATACTAA 939 0.3791 MSWCNESDDEERGIKLMAPTIIPRTSNNSVANETKPTQIRTITCPSCGYSIEFQDQGGILDLPGLPAGVKFDPNDHEILDHLEAKVLSNVPKLHPLINEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGIETRWHKTGKTRPIFVGGVVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGTNEEEKDGELVVSKIFYQTQPRQCGNSIIKDPFENQGLDHQSVHDDNIMHKNNAALGDYYNPSFINYDHVESSLQLIPNLVMQGASSSFIRLATMDANKGRLDRKY* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0547 312 Pfam No apical meristem (NAM) protein 66 205 IPR003441 GO:0003677|GO:0006355
Lan18g0547 312 Gene3D NAC domain 74 228 IPR036093 GO:0003677|GO:0006355
Lan18g0547 312 ProSiteProfiles NAC domain profile. 65 224 IPR003441 GO:0003677|GO:0006355
Lan18g0547 312 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 294 - -
Lan18g0547 312 SUPERFAMILY NAC domain 59 224 IPR036093 GO:0003677|GO:0006355
Lan18g0547 312 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 294 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0547 Lan-Chr18 10302959 10306369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0547 1 234 NAC Transcription Factor Family AT4G28500 68.511 9.60e-118 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan18g0547 NAM 4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0547 - - gmx:100795920 499.975