Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0539 ATGGCTTCCTCCAACAGACACTGGCCAAGCATGTTCAAATCCAAGCCTTACAATCAGTGGCAGCATGAAATCAACTCTTCCCTCATTTCAAATGGTTGTCACAGAAGCACTTACAATACTTCAGCTGCTGGGTGTGATGAAAGGAGTCCTGAACCAAAGCCAAGATGGAATCCAAGACCTGAACAAATTCGTATACTTGAAGCTATTTTCAACTCTGGGATGGTGAATCCTCCAAGAGATGAGATAAGGAAGATCCGGATGCAGTTGCAAGAGTATGGTCAAGTTGGTGATGCAAATGTTTTCTACTGGTTCCAGAACCGCAAATCTAGGAGCAAGAATAAACTTCGCAACCTTCAGAACTCAAAGAACCAAACCACACAACAAGCCCCACAACAAAATCTTGCCTCTATCTCTCAAATCACAGCACCTTCCTCCTCATCTTCCTCTGAGAAAACCTCTCCAAAAAATCAAATACTACCCACCAAGGGATTTTCTATTGGCTTCTCACACAACAATGAAGGGGTTGTGGTGCCCAATTCTTCAACCCCTTCTGTGAACCAGACATATTTTCAGACCTTTAATGAGACAAATTTGCTGCCACCACCATCATCTGAACCTTTCTTCTTTCCTTTGCACCAGAATGGGCAAGGAATTCTGGATAATAATACCAATAATAATAATAATGGTTTAGCAACACAGGGGTTTTGTTTTTCTGATCACTCTAACGTGGTTCAAGTTCAACCTTATCATTCTATGCTTCATGTTAACCAACAAAATGTTGGGCCTTGCACCAGTATCAGGAACTACGAGAACTCTTTAAAGAAAGACCAAGATCAAGACAAGGGAATGAAGTTAATGCATCAACTCCCACAACAAAGTTTCACTCTCACATCCACTACTCCAACTAATCTCACAGCAATCGTTTCTCCTCCCATCAATAATGCATCAGTTACTGCTTCATCCACTATAGCTCAACTTCAAGGTGTTGGTGATGCAACTGGTACGATGAAGTATTTGGTTTTCATAAACGACGTCGCATTTGAGGTTCCTGTTGGCCCCTTCAATGTGCGTGAGGCCTTTGGTATGGAGGCGGTGCTCCTTAACTCCTCCGGCAACCCTGTTCCGACCGACGAGTGGGGTGTTACTCTCCATTCACTCCAATATGGCGCTTATTATTATCTGATAACTTAA 1191 0.4274 MASSNRHWPSMFKSKPYNQWQHEINSSLISNGCHRSTYNTSAAGCDERSPEPKPRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRMQLQEYGQVGDANVFYWFQNRKSRSKNKLRNLQNSKNQTTQQAPQQNLASISQITAPSSSSSSEKTSPKNQILPTKGFSIGFSHNNEGVVVPNSSTPSVNQTYFQTFNETNLLPPPSSEPFFFPLHQNGQGILDNNTNNNNNGLATQGFCFSDHSNVVQVQPYHSMLHVNQQNVGPCTSIRNYENSLKKDQDQDKGMKLMHQLPQQSFTLTSTTPTNLTAIVSPPINNASVTASSTIAQLQGVGDATGTMKYLVFINDVAFEVPVGPFNVREAFGMEAVLLNSSGNPVPTDEWGVTLHSLQYGAYYYLIT* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0539 396 Gene3D - 53 119 - -
Lan18g0539 396 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 395 IPR044557 GO:0003700|GO:0050793
Lan18g0539 396 SUPERFAMILY Homeodomain-like 48 116 IPR009057 -
Lan18g0539 396 SMART HOX_1 51 118 IPR001356 GO:0003677
Lan18g0539 396 Pfam Homeodomain 53 113 IPR001356 GO:0003677
Lan18g0539 396 Coils Coil 108 128 - -
Lan18g0539 396 MobiDBLite consensus disorder prediction 119 164 - -
Lan18g0539 396 ProSiteProfiles 'Homeobox' domain profile. 49 114 IPR001356 GO:0003677
Lan18g0539 396 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 395 - -
Lan18g0539 396 CDD homeodomain 52 114 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0539 Lan-Chr18 10217775 10220669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0539 312 395 Wox Gene Family AT5G45980 46.429 2.66e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lan18g0539 Homeodomain 3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0539 - - cam:101490093 407.527