Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0534 ATGGCTATTCATGCAAATTCTGAATGGATTCTTGAGAATATATGGACAAAAATTATCAGCAGTGATGATGCAACAAAATCTCCCAAATCATGGGAAGAGTTGCCTAATTTTGATGGAAAAAATGTGTCTATGGAGATTCTGACAAGGCTTCCAAGTTTAGGAAGATGGATATCAACGGGAGCTGATTTTTGGGAAGAAATTTTGGATGGTACTATTCAACCTGCTTCAAGCAATAAAGTAGATTCTATTAATACCAATTTGGAAAATTGCACTGCTAATAAACCCAACAAAAAGATAGAAGATGGTGTTGTTAGGGCAAAACACTATAAAGGAGTGAGGAAAAGGCCATGGGGAAAATATGCAGCTGAGATTAGAGACTCAACAAAGAATGGTGCAAGAGTTTGGCTTGGAACATTTGAAACAGCTGAAGAAGCAGCATTGGCTTATGACAAAGCTGCTTTGAGAATTAGAGGTCAAAAAGCACACCTTAATTTCCCACTTGACACAGTTGCAAAGTCTTCAGGGTTTAACCATAAAGGAACCACTGGTGTCACTGCATGTGCTTCTAGAACTTTTCAAGAGGATTGTTCTTCTTCCACATTCATTGGAGACAAAGGAAAATCTAACAATGGACGAAATAGACGATCACAGAGAAGGAAAAGATTTGTGGATGAACAAACTGGTACCCAAAAAATGACAAGCTTGAAGGGTATGATAGAAAATGAAGTTGATGTTTTTGTGTTTCAGGACTTGGGGAGTGATTACTTGGAAAATTTGCTATCTTCTTATTAA 792 0.3737 MAIHANSEWILENIWTKIISSDDATKSPKSWEELPNFDGKNVSMEILTRLPSLGRWISTGADFWEEILDGTIQPASSNKVDSINTNLENCTANKPNKKIEDGVVRAKHYKGVRKRPWGKYAAEIRDSTKNGARVWLGTFETAEEAALAYDKAALRIRGQKAHLNFPLDTVAKSSGFNHKGTTGVTACASRTFQEDCSSSTFIGDKGKSNNGRNRRSQRRKRFVDEQTGTQKMTSLKGMIENEVDVFVFQDLGSDYLENLLSSY* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0534 263 MobiDBLite consensus disorder prediction 203 229 - -
Lan18g0534 263 SMART rav1_2 108 172 IPR001471 GO:0003700|GO:0006355
Lan18g0534 263 ProSiteProfiles AP2/ERF domain profile. 108 166 IPR001471 GO:0003700|GO:0006355
Lan18g0534 263 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF091 12 262 - -
Lan18g0534 263 PRINTS Ethylene responsive element binding protein signature 109 120 IPR001471 GO:0003700|GO:0006355
Lan18g0534 263 PRINTS Ethylene responsive element binding protein signature 132 148 IPR001471 GO:0003700|GO:0006355
Lan18g0534 263 CDD AP2 107 166 IPR001471 GO:0003700|GO:0006355
Lan18g0534 263 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 12 262 - -
Lan18g0534 263 Pfam AP2 domain 108 158 IPR001471 GO:0003700|GO:0006355
Lan18g0534 263 Gene3D AP2/ERF domain 107 168 IPR036955 GO:0003700|GO:0006355
Lan18g0534 263 SUPERFAMILY DNA-binding domain 108 167 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0534 Lan-Chr18 10170720 10171511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0534 10 263 AP2-EREBP Transcription Factor Family AT4G18450 36.304 3.46e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan18g0534 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0534 - - lang:109334345 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0683 18 12084946 12087523 Lan18g0534 18 10170720 10171511 PCT
Lan6g0592 6 5194304 5197317 Lan18g0534 18 10170720 10171511 PCT
Lan18g0534 18 10170720 10171511 Lan18g0683 18 12084946 12087523 PCT
Lan18g0534 18 10170720 10171511 Lan6g0592 6 5194304 5197317 PCT