Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0509 ATGGGAAAGAAGGGGAGTTGGTTTGCTGCAATAAAGAGGGTTTTCACAAACCACTCCAAGGAAAGGGTAGTTAATCAGGATTCAGATAATAAAAGTACAAAAGAGAAGAAGAAAGGAAAACTAAGGCATGGAGAGACCAATTCTTTCATTCCTCTCTTCAGAGAGCCAAGCAGCATTGAGAAAATATTTGCTGACTTCGAAAGAGAGCAACAAATACTTACTGTTAGGCCTCCTACACCCTCTGAGCAACCTAAGACACAACCTTTTGTCCTTCCTAGAGCTGCTTCTCCACAGCCTCCGTCTCCAAGGCCACTATCTCCACGACTGACCTCTCCCAAAGCTGCACCCTCCCGGATGGTTCATCGCCCCAAGGAGGTTGGCTATAGACCAGAACCAACTCTGAGGAACCAGCATGATTCTGCAACTAAGGTCCAGGCTGCTTTTAGAGGTTATATGGCCAGGAAGAGTTTTAGAGCTCTAAAGGGTTTGGTGAGGCTTCAAGGAGTAGTAAGAGGACAGAATGTGAAGAGGCAGACAGTTAATGCCATGAAACACATGCAGCGTTTGGTACGAGTTCAATCTCAGATTCGATCTCGAAGGATTCAGATGCTAGAAAACCAGGCACGATATCAAGCTGAGTTCAAGAATGACAATGCAAGTACATTGGGCAAATTGTCTGAGGCACATGGAAACTGGGATGATAGCTTACTGACAAAGGAAGAAAGAGAGGCAAGGTTGCAGAGAAAGGTGGAAGCAATCCTCAAAAGAGAAAGAGCAATGGCATTTGCATATTCACATCAGTTGTGGAAAGGTACTCCAAAATCAAATCAAACACCGGTATCAGATATGCAATCCGGGGGATTTCGGTGGTGGTGGAACTTGTTGGAAAGTCAAGTGCCAGCAGCATCAAATGGACAAGAAAGACAAGTCTTGAAGAATTTCAAACTTACACCTCCTAGACCATACTCAGAACAAAAGACTAGTCCAAGACCAACCTCAAGCACTCCTTTGCAGCACCATTTTGCCTTTGACAATATCGACACGCCAACCCCAAAATCCACCAAATCAACAATAGTTACATCTTCAAAACCGACAAGAACTCCTCCATACAGAACTCCACAAGGAAACACCTCAAAATACTCAAAGCCAAGGGCTATAGGATCACATTCACCTTTTGATATGCTACTAAAGGATGATGATAGTCTCACTAGCTGCCCTCCATTTTCAGTGCCAAATTACATGGTTCCAACAGTTTCTGCTAAGGCAAAAGCGCGCACGAATTGTAATCAGAGAGAAAGATTTGGTGGAACTCCAACCAGTGAATCATCACAGAGGAGGTCTTCATTTCCTTTGTCAGAAGGCATTGGATCATTTAAATGGACTAAAGGGTCATTGTTCTCAAACAAGGATTCTAGCTCTAAATATCAGTCATTTGAAACTTTAGGGAACATGAGTGTGGATTCAACAGTATCTATGCCAGCAACAGTGGGAAGAAAGCCTTTTACAAGATTTGTGTGA 1518 0.4341 MGKKGSWFAAIKRVFTNHSKERVVNQDSDNKSTKEKKKGKLRHGETNSFIPLFREPSSIEKIFADFEREQQILTVRPPTPSEQPKTQPFVLPRAASPQPPSPRPLSPRLTSPKAAPSRMVHRPKEVGYRPEPTLRNQHDSATKVQAAFRGYMARKSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQRLVRVQSQIRSRRIQMLENQARYQAEFKNDNASTLGKLSEAHGNWDDSLLTKEEREARLQRKVEAILKRERAMAFAYSHQLWKGTPKSNQTPVSDMQSGGFRWWWNLLESQVPAASNGQERQVLKNFKLTPPRPYSEQKTSPRPTSSTPLQHHFAFDNIDTPTPKSTKSTIVTSSKPTRTPPYRTPQGNTSKYSKPRAIGSHSPFDMLLKDDDSLTSCPPFSVPNYMVPTVSAKAKARTNCNQRERFGGTPTSESSQRRSSFPLSEGIGSFKWTKGSLFSNKDSSSKYQSFETLGNMSVDSTVSMPATVGRKPFTRFV* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0509 505 PANTHER IQ-DOMAIN 13 1 502 - -
Lan18g0509 505 MobiDBLite consensus disorder prediction 320 384 - -
Lan18g0509 505 MobiDBLite consensus disorder prediction 313 385 - -
Lan18g0509 505 ProSiteProfiles IQ motif profile. 137 165 IPR000048 GO:0005515
Lan18g0509 505 MobiDBLite consensus disorder prediction 18 49 - -
Lan18g0509 505 MobiDBLite consensus disorder prediction 18 44 - -
Lan18g0509 505 Pfam IQ calmodulin-binding motif 138 158 IPR000048 GO:0005515
Lan18g0509 505 MobiDBLite consensus disorder prediction 74 139 - -
Lan18g0509 505 SMART iq_5 136 158 IPR000048 GO:0005515
Lan18g0509 505 MobiDBLite consensus disorder prediction 118 132 - -
Lan18g0509 505 Gene3D - 127 164 - -
Lan18g0509 505 Pfam Protein of unknown function (DUF4005) 360 456 IPR025064 -
Lan18g0509 505 PANTHER IQ-DOMAIN 5-RELATED 1 502 - -
Lan18g0509 505 MobiDBLite consensus disorder prediction 430 450 - -
Lan18g0509 505 MobiDBLite consensus disorder prediction 93 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0509 Lan-Chr18 9752446 9757719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0509 1 505 IQD Protein Family AT3G59690 49.369 3.16e-158 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0509 - - lang:109331805 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0776 6 7161070 7166207 Lan18g0509 18 9752446 9757719 LSH
Lan18g0509 18 9752446 9757719 Lan17g0710 17 6367754 6372648 LSH