Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0505 ATGATGGGACATAAAAGGAGCCATTGTTCTGTTGACCAAAGTAGTTATACTTCTATTGCATCTAAAAGGCAAAAAGCTGATGTATCTATCACCACAAAGGAGAGGAAGGAGAAGCTCGGCGAACGAATTGTTGCCCTGCAACAACTTGTTTCGCCATATGGGAAGACTGATACATCTTCTGTCCTAAAGGAGGCAATGGAATATATAGGGTTCCTTCATCAACAAGTTAAGGTGCTTAGTGCTCCTTACCTAGAAAGTTCACCAAAAACCGAGATGCAGGTGAGCATGAACAATACCACAGTGGGTATGGAACCATGCAGCATGAGGAGTAGAGGGTTATGTCTTGTTCCTGTCTCATTAACAATGGGAGTTGCTGATAGCAATGGTGCAGATATCTGGGCTCCCATCAAGACCACTTCACCTAAATTTGAGAAGGATGGTGACTCTCAATTTTATTGA 459 0.427 MMGHKRSHCSVDQSSYTSIASKRQKADVSITTKERKEKLGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHQQVKVLSAPYLESSPKTEMQVSMNNTTVGMEPCSMRSRGLCLVPVSLTMGVADSNGADIWAPIKTTSPKFEKDGDSQFY* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0505 152 CDD bHLH_AtbHLH_like 29 80 IPR045239 -
Lan18g0505 152 Gene3D - 20 96 IPR036638 GO:0046983
Lan18g0505 152 PANTHER TRANSCRIPTION FACTOR BHLH154 1 131 - -
Lan18g0505 152 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 23 72 IPR011598 GO:0046983
Lan18g0505 152 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 25 88 IPR036638 GO:0046983
Lan18g0505 152 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0505 Lan-Chr18 9718140 9723208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0505 1 151 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 50.000 2.18e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0505 - - lang:109333137 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0505 18 9718140 9723208 Lan17g0713 17 6396162 6400988 LSH