Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0502 ATGGTTTCAAACACTGCTGGAAAGGTCATACGTTGCAAAGCTGCGGTGGCATGGGAAGCTGCTAAGCCACTGGTGATAGAGGAAGTGGAAGTATCTCCACCACAGGCAAATGAGGTTCGTGTCAAGATTTTATTCACCTCACTCTGCCATACTGATGTCTACTTTTGGGAAGCAAAGGGACAAACACCTTTATTTCCACGTATATTTGGTCATGAAGCAGGAGGAATTGTGGAAAGTGTTGGTGAGGGTGTAACAGATCTCAAGCCTGGTGATCATGTGCTACCGGTGTTCACAGGTGAGTGCAAGGAGTGTCAGCATTGCAAATCAGAGGAAAGTAACATGTGTGACCTCTTAAGGATTAATACTGACCGTGGTGTAATGCTCAATGATGGGAAGTCAAGGTTCTCAATTAATGGAAAACCAATATACCATTTTGTTGGAACATCCACTTTCAGTGAATACACTGTTGTTCATGTTGGCTGTCTTGCCAAAATTAACCCAGCTGCCCCACTTGATAAAGTGTGTATTTTAAGCTGTGGAATCTCAACAGGTCTTGGTGCTACATTGAATGTTGCAAAACCAACCAAAGGCTCATCAGTGGCTATATTTGGGTTAGGAGCTGTTGGCCTTGCAGCTGCTGAGGGAGCTAGACTTGCTGGAGCTTCCAGGATTATAGGGGTTGACTTGAATTCTACAAGATTTATTGAAGCCAAGAAGTTTGGAGTTAATGAGTTTGTGAATCCAAAAGAACATGACAAGCCAGTTCAAGAGGTGATTGTTGCAATGACTGGCGGGGGAGTTGACCGTAGTGTTGAATGTACGGGAAGTGTTAATGCAATGATATCTGCATTTGAATGCGTGCATGATGGATGGGGTGTGGCTGTACTTGTTGGTGTGCCAAATAAAGACGATTCATTCAAAACGCATCCCATCAATTTATTAAATGAAAGGACTCTCAAGGGTACTTTCTTTGGAAATTATAAACCACGTTCCGACCTTCCATCAGTGGTAGAAATGTACATGAACAAGGAACTTGAATTGGAGAAATTCATCACCCACAGAGTACCTTTCTCAGAAATCAACAAAGCCTTTGAATACATGCTTAAAGGGGAGGGTCTGCGCTGTATTATCCACATGACTGAATAG 1146 0.4293 MVSNTAGKVIRCKAAVAWEAAKPLVIEEVEVSPPQANEVRVKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECQHCKSEESNMCDLLRINTDRGVMLNDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCLAKINPAAPLDKVCILSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARLAGASRIIGVDLNSTRFIEAKKFGVNEFVNPKEHDKPVQEVIVAMTGGGVDRSVECTGSVNAMISAFECVHDGWGVAVLVGVPNKDDSFKTHPINLLNERTLKGTFFGNYKPRSDLPSVVEMYMNKELELEKFITHRVPFSEINKAFEYMLKGEGLRCIIHMTE* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0502 381 SUPERFAMILY GroES-like 5 187 IPR011032 -
Lan18g0502 381 Gene3D - 184 322 - -
Lan18g0502 381 PANTHER ALCOHOL DEHYDROGENASE 4 379 - -
Lan18g0502 381 Pfam Zinc-binding dehydrogenase 207 337 IPR013149 -
Lan18g0502 381 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Lan18g0502 381 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 170 343 IPR036291 -
Lan18g0502 381 Pfam Alcohol dehydrogenase GroES-like domain 37 162 IPR013154 -
Lan18g0502 381 Gene3D - 21 371 - -
Lan18g0502 381 PANTHER ALCOHOL DEHYDROGENASE 1 4 379 - -
Lan18g0502 381 SUPERFAMILY GroES-like 329 378 IPR011032 -
Lan18g0502 381 CDD alcohol_DH_plants 10 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0502 Lan-Chr18 9596054 9599502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0502 16 371 Monolignol Biosynthesis Gene Families AT1G72680 25.000 1.17e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0502 K18857 - gmx:100783318 714.531