Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0497 ATGGATGGTAGTGCAATGAATATTGGTCCAGGAATGGATTTGCCAATAATGCATGAGAGTGATCGCTATGAACTTGTTCGTGATATTGGTTCTGGTAATTTCGGAGTAGCTAGGCTTATGAGGGACAAGCACACTGATCAACTTGTTGCTGTTAAGTATATTGAGAGAGGTCAAAAGATAGATGAAAATGTAAAAAGGGAAATAATCAATCACAGATCCTTGAGGCATCCAAATATTGTCAGGTTCAAAGAGGTTATATTGACCCCAACACATTTGGCTATTGTGATGGAATATGCTTCAGGAGGGGAGTTATTTGAGAGAATATGCAATGCAGGACGGTTCAGTGAGGATGAGGCACGCTTCTTCTTCCAACAACTTATATCAGGAGTTAGCTACTGCCATACAATGCAAGTATGCCATCGCGATTTGAAGTTGGAAAATACATTGCTAGATGGTAGTCCAGCACCTCGTTTGAAGATTTGTGATTTTGGGTATTCAAAGTCATCAGTGCTACACTCACAACCAAAATCAACAGTTGGTACCCCTGCGTACATCGCCCCGGAAATTTTGCTTAAGAAGGAATATGATGGAAAGCTTGCAGATGTGTGGTCTTGTGGGGTGACCTTATATGTAATGCTAGTAGGTGCATATCCTTTTGAGGATCCAGATGAACCTAAAAACTTCCGCAAGACAATACATAGAATTTTGAATGTTCAATACTCAATTCCTGATTATGTTCACATATCTCCAGAGTGTCATCACCTGATCTCGAGGATTTTTGTTGCAGACCCTGCAAAGAGAATAACTATTCCTGAGATTAGAAACCATGAGTGGTTTTTAAAGAACCTCCCGGCTGATCTCGTGGATGGTAATGCAATGAACAACCAATTGGAAGAGCCTGATCAACCAACTCAAAGCATGGAAGCAATCATGCAGATAATTAGTGAGGCTACAATTCCTGAAGCTGGAGCTCAGTCTCACAATCAGTATCTTACCGGTTGCTTGGATATCGATGAAGATATGGACGACGATGACTTAGAGAGTGACCCTGACCTTGATATTGATAGCAGTGGAGAAATAGTTTATGCTATATAA 1095 0.4073 MDGSAMNIGPGMDLPIMHESDRYELVRDIGSGNFGVARLMRDKHTDQLVAVKYIERGQKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHTMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEILLKKEYDGKLADVWSCGVTLYVMLVGAYPFEDPDEPKNFRKTIHRILNVQYSIPDYVHISPECHHLISRIFVADPAKRITIPEIRNHEWFLKNLPADLVDGNAMNNQLEEPDQPTQSMEAIMQIISEATIPEAGAQSHNQYLTGCLDIDEDMDDDDLESDPDLDIDSSGEIVYAI* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0497 364 Gene3D Transferase(Phosphotransferase) domain 1 99 287 - -
Lan18g0497 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Lan18g0497 364 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0497 364 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0497 364 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0497 364 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 14 359 - -
Lan18g0497 364 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Lan18g0497 364 SUPERFAMILY Protein kinase-like (PK-like) 16 307 IPR011009 -
Lan18g0497 364 Gene3D Phosphorylase Kinase; domain 1 4 98 - -
Lan18g0497 364 CDD STKc_SnRK2-3 22 278 - -
Lan18g0497 364 PANTHER SERINE/THREONINE KINASE 14 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0497 Lan-Chr18 9521457 9525160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0497 16 294 CBL-interacting serine-threonine protein kinases AT4G24400 43.403 8.77e-71 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lan18g0497 Pkinase 6.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0497 K14498 - gmx:100804702 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1018 18 15229976 15234835 Lan18g0497 18 9521457 9525160 PCT