Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0496 ATGGGTTCGGTTCCTGCAGAACTAAGCTTAGATTTAAGACCCAATTTTGTTTCAAAAACCATCACTGATTTTCTCTCCACCCTTCCTTCTTCCCAAAACAACAAGCTTTCTCTCCTCAACGATTTTATTGCCCGTTTGGAACATGAATTCAGAAAGATCGATGCTTTCAAACGCGAACTACCTCTCTCTATGCTCATCTTAAACGATGCAATTTCAGTTTTGAAGGAAGAATCAGAAAAATGCATGAGTTATAAATCTCAGCCAGTGTTGGAAGTGTTTATTCCTTTGAAGAAAGAGTGTGATGAGGAGTATGAGGTAAATAATAACAAGGACAAGGAATGCAAAGATAAGAAGAATTGGATGAGTTCTGTTCAGCTTTGGAACACTACAACAACAACTAATAATGTCTATGACCAAAAACAGCATCATCATAAATTAGTTATCAAGAAAATTGAAGATGAAAGGAAATCTGTGGCTGAGAACCATTTCCAACCAAGTAGTAGTAGAAATGAAGGAGGAAGAGGATTTTTACCTTTATCTACATGCACTTCTATTCCTATGACAACAGTGGCACTGCCACCAACCAAAGAAGAGATTGAAGAAGGTGCCGTGAATACATTTTCACTTTTGACCCCTCCTCTTGCAGTGAAGAACTCGAGGAAGGGATGTAGTTCAAGTGTATCCGGAACCAATTCCAATAGGGAACTTTCATCCTCTCCTCCTACAGCTTTGCCAAGTTTATGCACTGGATTGCTTCAGCAGCAGCAAGCTTCTAGAAAGCAGAGGAGATGCTGGTCTCCAGAGTTGCACCGCCGATTTGTCAATGCCCTGCAGAATCTTGGAGGCTCTCAAGTGGCGACACCAAAGCAAATTAGAGAACACATGCAGGTTGATGGCCTAACCAATGACGAAGTCAAGAGCCATTTACAAAAATATCGACTTCATACACGTAGAGCACCTTCTACAAATACTGATCAGCCTGTTGTAGTTCTCGGAGATTTGTGGATGTCCCAAGATCAGTGCAATGGCTCCCCAAAGGGTAGCAGTTCAGGGTCTGGTTCTCCTCAAAGTCCCCTTCACTTAGCTACTCGATCCCGGGGAGGGATGGATAGCATGGAAGACGAGGAAGATGCAAAATCTGAGAGTTATAGTTGGAAGAGTCACATTCACAACAAAACTGGAAAAGTTGGTGTATAG 1197 0.4194 MGSVPAELSLDLRPNFVSKTITDFLSTLPSSQNNKLSLLNDFIARLEHEFRKIDAFKRELPLSMLILNDAISVLKEESEKCMSYKSQPVLEVFIPLKKECDEEYEVNNNKDKECKDKKNWMSSVQLWNTTTTTNNVYDQKQHHHKLVIKKIEDERKSVAENHFQPSSSRNEGGRGFLPLSTCTSIPMTTVALPPTKEEIEEGAVNTFSLLTPPLAVKNSRKGCSSSVSGTNSNRELSSSPPTALPSLCTGLLQQQQASRKQRRCWSPELHRRFVNALQNLGGSQVATPKQIREHMQVDGLTNDEVKSHLQKYRLHTRRAPSTNTDQPVVVLGDLWMSQDQCNGSPKGSSSGSGSPQSPLHLATRSRGGMDSMEDEEDAKSESYSWKSHIHNKTGKVGV* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0496 398 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 7 390 IPR044787 GO:0003700|GO:0006355
Lan18g0496 398 MobiDBLite consensus disorder prediction 218 242 - -
Lan18g0496 398 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 257 317 IPR017930 -
Lan18g0496 398 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 260 315 IPR006447 GO:0003677
Lan18g0496 398 Gene3D - 259 317 - -
Lan18g0496 398 Pfam Myb-like DNA-binding domain 262 313 IPR001005 -
Lan18g0496 398 MobiDBLite consensus disorder prediction 367 388 - -
Lan18g0496 398 MobiDBLite consensus disorder prediction 337 398 - -
Lan18g0496 398 MobiDBLite consensus disorder prediction 337 361 - -
Lan18g0496 398 SUPERFAMILY Homeodomain-like 258 318 IPR009057 -
Lan18g0496 398 MobiDBLite consensus disorder prediction 217 242 - -
Lan18g0496 398 PANTHER TRANSCRIPTION FACTOR HHO6 7 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0496 Lan-Chr18 9481026 9483877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0496 6 355 G2-like Transcription Factor Family AT2G03500 38.360 3.03e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan18g0496 Myb_DNA-binding 2.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0496 - - gmx:100806237 455.292