Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0493 ATGGGGATTTGCACTTCTAAGCCAGATAAACCAAACCCATATGCACCTAGTGAACCAGAAGCTGAAAATGACTCTTTTGACCCTTCACAAATCCCAAAAACCCCAGCCACTCCCAGCAACCACCGCCGGAAAGATGACGTCAGCACCGGAAAGAAGTCCCCTTTCTTCTCGTTCTACAGTCCCAGCCCTGCCCGCTTCTTCAAGCAGTCTCCTTCGCCTTCTGCCGGAGGGAGCAAGAGCGCGAGCTCAACGCCGATGAGGTTTTTACGGCGGCCGTTCCCTCCGCCGTCTCCGGCGAAGCACATAAAAGCCTTGCTGGCTAGGCGGCAGGGGAAGAAATCCGCTACGGCGGGAGAAGGAGAAGAGAATGCTGGAGGTGGTGATTTGGATAAGAGGTTTGGGTTTTCAAAGGAATTCAGTAGTAAGTTAGAGATTGGTGAAGAAGTTGGAAGAGGGCATTTTGGGTATACATGTTCTGCTAGGTTCAAGAAGGGTGAGCTTAAGGACCAGAAAGTTGCTGTGAAGGTTATCCCAAAAGCTAAGATGACAACAGCAATCGCAATTGAAGATGTGAGGAGGGAGGTGAAAATATTGCGAGCTTTGAATGGACACAACAATCTGGTACAATTCTATGATGCATTTGAGGACCAAGATAATGTCTACATTGTAATGGAGTTATGTGAAGGGGGAGAGCTTTTAGATATGATACTATCAAAAGGAGGGAAATACACAGAAGATGATGCAAAGGCTGTCATGGTACAGATACTAAATGTTGTTGCATTTTGTCATCTTCAGGGTGTGGTGCACCGAGATCTGAAGCCAGAGAATTTTTTGTATGCTTCAAAGGATGAAAATTCTGAGTTAAAAGCTATAGACTTTGGATTATCAGACTTTGTCAGACCAGATGAACGACTTAATGACATTGTTGGAAGTGCATACTATGTGGCCCCTGAAGTTCTCCATAGATCTTACACCACAGAGGCTGATGTGTGGAGTATAGGCGTGATGGCATATATTCTTTTATGCGGTAGTCGACCATTTTGGGCACGAACGGAATCTGGTATTTTTCGGGCAGTTTTAAAAGCTGATCCATGCTTTGATGAAGCTCCCTGGCCTACTTTATCTACTCAAGCAAAAGACTTTGTCAAGCACCTATTGTATAAGGACCCGCGGAGGCGAATATCTGCAGCTCAGGCTCTATGTCACCCTTGGATACGAAATTACAACAGCGTAAAAGTTCCACTTGATATTTTAATATTTAAGCTCATGAAGGCTTATATGCGATCATCATCCTTGCGCAAGGCTGCCTTAAGGGCGTTGTCGAAAACATTGACTGCTGATGAACTCTATTATCTGAGGGAACAATTTGCACTGTTGGAACCAAGCAAAAATGGAAGCATATCCTTAGAGAACATTAACCAGCTGAATGCATTACAATATAGAAGAATGGATTTTGAAGAATTTTGTGCAGCTGCATTAAGTGTACATCAGCTTGAGGCTCTTGATCGTTGGGAACAACATGCCCGGTGTGCATATGAACTTTTTGAGAAAGATGGAAACAGGGCTATTATGATTGAAGAACTTCCTTCTGAACTTGGACTTGGTCCTTCTATCCCCGTTCATGTTGTTCTTCACGACTGGATCCGGCACACTGATGGGAAGCTAAGCTTTCTTGGGTTTGTCAAATTATTACATGGTATATCTAGCCGAACTCTCCCGAAGGTTCAATGA 1731 0.4437 MGICTSKPDKPNPYAPSEPEAENDSFDPSQIPKTPATPSNHRRKDDVSTGKKSPFFSFYSPSPARFFKQSPSPSAGGSKSASSTPMRFLRRPFPPPSPAKHIKALLARRQGKKSATAGEGEENAGGGDLDKRFGFSKEFSSKLEIGEEVGRGHFGYTCSARFKKGELKDQKVAVKVIPKAKMTTAIAIEDVRREVKILRALNGHNNLVQFYDAFEDQDNVYIVMELCEGGELLDMILSKGGKYTEDDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYASKDENSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYTTEADVWSIGVMAYILLCGSRPFWARTESGIFRAVLKADPCFDEAPWPTLSTQAKDFVKHLLYKDPRRRISAAQALCHPWIRNYNSVKVPLDILIFKLMKAYMRSSSLRKAALRALSKTLTADELYYLREQFALLEPSKNGSISLENINQLNALQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIMIEELPSELGLGPSIPVHVVLHDWIRHTDGKLSFLGFVKLLHGISSRTLPKVQ* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0493 576 PANTHER CDPK-RELATED KINASE 2 41 473 - -
Lan18g0493 576 PANTHER CDPK-RELATED KINASE 2 473 570 - -
Lan18g0493 576 Gene3D Phosphorylase Kinase; domain 1 145 232 - -
Lan18g0493 576 Pfam Protein kinase domain 144 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0493 576 MobiDBLite consensus disorder prediction 66 129 - -
Lan18g0493 576 MobiDBLite consensus disorder prediction 23 37 - -
Lan18g0493 576 CDD STKc_CAMK 144 404 - -
Lan18g0493 576 SUPERFAMILY Protein kinase-like (PK-like) 141 444 IPR011009 -
Lan18g0493 576 ProSiteProfiles Protein kinase domain profile. 143 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0493 576 SMART serkin_6 143 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0493 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Lan18g0493 576 SUPERFAMILY EF-hand 436 565 IPR011992 -
Lan18g0493 576 MobiDBLite consensus disorder prediction 66 85 - -
Lan18g0493 576 PANTHER SERINE/THREONINE-PROTEIN KINASE 473 570 - -
Lan18g0493 576 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 473 - -
Lan18g0493 576 Gene3D Transferase(Phosphotransferase) domain 1 233 428 - -
Lan18g0493 576 ProSitePatterns Protein kinases ATP-binding region signature. 149 175 IPR017441 GO:0005524
Lan18g0493 576 MobiDBLite consensus disorder prediction 1 54 - -
Lan18g0493 576 Gene3D - 429 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0493 Lan-Chr18 9374509 9379859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0493 1 572 EF-hand Containing Proteins AT3G50530 68.878 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan18g0493 Pkinase 1.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0493 - K00924 gmx:100798913 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0298 17 2087816 2092289 Lan18g0493 18 9374509 9379859 PCT