Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0474 ATGAACTTCAGAAGCTACAGTGATAACCCCAATGGGGATGGCATGAATGGGAAGCCACCAGAAAATGTTAGTCTGATGAGGCAGTCTTCAATATACTCCTTGACATTTGATGAGTTGGAGCACACTATGGGTGGGTTTGGAAAGGATTTTGGGTCAATGAACATGGATGAACTCTTGAAAAGTATATTAACAGCTGAAGAGGCTCAAGCTATGGCATCTTCAGGTGCTGGTGGTGGAGGAGATTGTTTTAACCCAAGTGTTAATCTGCAAAGACAAGGTTCTATAACATTGCCAAGGACTCTTAGTCAGAAAAAAGTTGATGAGGTTTGGAGGGATTTGATAAAAAATGAGAGTAGCAATGTGGGTTCATCTTTGCCTCAAAGACAACCAACATTAGGAGAAATTACTTTGGAGGAGTTTTTGGCTAGAGCTGGAGTTGTAAGAGAAGACATGCCTCAGCCTCAGCCTCAACAAATTGGAAGACCAAATAATAATGCATGGTTTGGTGACTTCTCTAGACCAAATAATAGTAACACTGGTCTGATTCTTGGGTTTCAGCAACCAAACACAAGCAATGGGAATTTGAGTAACAACAGGATTCTAGATGGTACTAATTTGGTTCCTGAACAAATTCCTCCTTCTTTGTCATTAACCTCAAACCATTCTAAACAGCACCAGCAGCCACCACTTTTCCCAAAACCAGCAAATGTAGCTTTTGCTACTGTTAGTGCTCCTATGCATCTATTAAGCAATGCTCAACTTGCTGGCCCTGGCACAAGAGGAGGGGTCATCGGATTTCAAGGTCCTTCGATGAATGGTACATTAGCCCAAAGCAGAGGACTGCAAGGTGCTGGAATGGGTGGTTTAATCACGGCCAATGTCACAGCTCCCGGTGCTTCTCCGGCTAGAAAAATATCACCAGATGTTATTGCAAACAGTAATGTAGATACGTCTCCACTGCCACCAGTTCCTTATGTGATCAATAGGGGAAGGAAGTGCAGTGCTGTAGAGAAAGTTGTTGAGAGGAGACAAAGGAGAATGATAAAAAATAGAGAATCGGCTGCAAGGTCGCGAGCTCGCAAGCAGGCCTACACTTTTGAACTAGAGGCTGAAGTTGCAAAACTTAAGGAATTAAACCAAGAATTACAGAGAAAACAGGCAGAAATTATGAAAACGCAGCAAAATCAGGATTTGGACCCTTCATACCGCCCGTGGATAAGTAAAAGACAATGTTTGAGAAGGACACTCACAGGTCCATGGTAG 1263 0.4283 MNFRSYSDNPNGDGMNGKPPENVSLMRQSSIYSLTFDELEHTMGGFGKDFGSMNMDELLKSILTAEEAQAMASSGAGGGGDCFNPSVNLQRQGSITLPRTLSQKKVDEVWRDLIKNESSNVGSSLPQRQPTLGEITLEEFLARAGVVREDMPQPQPQQIGRPNNNAWFGDFSRPNNSNTGLILGFQQPNTSNGNLSNNRILDGTNLVPEQIPPSLSLTSNHSKQHQQPPLFPKPANVAFATVSAPMHLLSNAQLAGPGTRGGVIGFQGPSMNGTLAQSRGLQGAGMGGLITANVTAPGASPARKISPDVIANSNVDTSPLPPVPYVINRGRKCSAVEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKELNQELQRKQAEIMKTQQNQDLDPSYRPWISKRQCLRRTLTGPW* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0474 420 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 345 360 IPR004827 GO:0003700|GO:0006355
Lan18g0474 420 SUPERFAMILY Leucine zipper domain 342 391 IPR046347 GO:0003700|GO:0006355
Lan18g0474 420 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 18 420 IPR043452 GO:0003700|GO:0045893
Lan18g0474 420 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 340 391 IPR004827 GO:0003700|GO:0006355
Lan18g0474 420 Coils Coil 361 395 - -
Lan18g0474 420 Gene3D - 340 397 - -
Lan18g0474 420 Pfam bZIP transcription factor 342 394 IPR004827 GO:0003700|GO:0006355
Lan18g0474 420 SMART brlzneu 338 396 IPR004827 GO:0003700|GO:0006355
Lan18g0474 420 CDD bZIP_plant_BZIP46 342 396 - -
Lan18g0474 420 MobiDBLite consensus disorder prediction 1 23 - -
Lan18g0474 420 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7 18 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0474 Lan-Chr18 9102427 9106102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0474 25 420 bZIP Transcription Factor Family AT3G19290 48.409 2.96e-98 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan18g0474 bZIP_1 5.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0474 K14432 - gmx:100776600 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0474 18 9102427 9106102 Lan17g0731 17 6791537 6795470 LSH