Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0471 ATGCTTCCTTCCTTGTTTGGATTGTTGGCTTTTCTAGGAATACAGCTCCCTGTAGTAATGTCTGATTGCCCTTTGGATCTTACTTTTTCAAACTTCACATTGGCATCCTCTATATGTTCTAATCAGGGTGACAGGGGCAAATGCTGCCGCTACATTAATGCTAACATTGCAATCTCAGTTGCCCGTTTTGTTAATACAACAAGCGGCCTAGGGGTTCCTCCAGATGCCTCTGACATCTGCCTCCAGACCATATCTCAGACTTTGCACCTTTATGGTGTTGTACGAAATGCAACAGTTTTCTGTGGTCTTGGGACAAAAATTCCTGTTAATTATGAATGCAAGGCTCGAACAACTGTCATTGAAATGCTGCAATCTCCTAGATTTGTAGAGGTCACAAAAAATTGCAAACTGCCGCTGGGAGAGGAAATTAAATGCAAGAAGTGCTTAAATTCTGGCATTGGTTTTCTACATCATCTTGGAATTGAAGATAATATAACACTGAGTACATGTCGTGACGCCTCTTTTGTTGCACTAGCAAGCCAAGTTGATCAAAAATCTAGCATTGACATTGCAAGTTGTTTCTTTGGAGTTCAAGGACTTCTTGGGGCACCTGCTTCAGAGTCATCCCCATCCTTGCCTGCTCCCGAGGCTTCTCCCAGCTCGGTGGTTGCTGATAGCCCAAGTCAATTATTGATAGGTCTACCTTTAAAGGAAAAACACCATTCATATCACTTGACAATAGTTCCAGGTATTGCTATCGCCGTCACAGCTGTTGCTGTTATGATGCTTCTAGTCTTGATAGTTCTAATTCGCCAGAAAAGCAAAGAGCTAGACGAGCCTGATAATTTTGGTAAAACCTCTTCAAAAGCCTTACCTCCTAGTGCAACTTGGAAATTTCAGGAAGGTTCTTCATCCATGTTCCGAAAATTTAGCTATAAGGAGATAAAGAAAGCAACAGAGGATTTTAGCACCATCGTTGGGCAAGGGGGATTTGGGACAGTGTATAAAGCTCATTTCAGCGATGGTCTGGTGGCAGCAGTAAAGCGGATGAACAGAGTGTCAGAGCAAGCAGAGGATGAGTTCTGCAGAGAAATTGAGCTTCTTGCCCGGCTTCACCATCGGCATCTTGTTTCTCTAAGAGGCTTTTGCATTAAAAAACATGAAAGGTTTCTGATGTATGAGTACATGGGAAATGGAAGCTTGAAAGATCACCTTCATTCCCCCGGTAAAACACCTTTAACTTGGCGAACAAGAATACAAATTGCCATCGACGTGGCTAATGCACTGGAGTACCTTCATTTCTATTGTGATCCTCCTCTGTACCACAGAGACATCAAGTCTAGCAACACTTTACTAGACGAGAACTTTGTTGCTAAGATCGCTGATTTTGGCCTTGCTCAAGCTTCAAAAAATGGTTCAATATGCTTTGAACCTGAAAACACCGAAATCTGGGGAACACCAGGATATATAGATCCTGAATATGTTGTTACTCAAGAGCTCACTGAGAAAAGTGATATATACAGTTTCGGGGTGCTGCTACTGGAGATTATAACAGGAAGACGAGCTATTCAAGATAATAAGAATTTGGTGGAATGGGCACAACCATACATGGAATCAGAAACCAGATTATTGGAGCTTGTAGATCCCAATGTGAGGGAGTCTTTTGACTTGGATCAGCTCCAAACAGTAGTATCTATAGTTGGATGGTGCACTCAGAGAGAAGGAAGGGCAAGGCCTTCAATAAAACAGGTCTTAAGGCTTCTGTATGAGACATCAGAACCAATGCATAGTGAGTTTCTACAGGTCGATGAAGATGCAGAATGCCACGGAAATCAGCAGAGAGGCCGAAGGAGCAAGGGAAAAATGCTCAGAAACGAAGTGGTTTTTCACAGTGGGGATGGAAGGTATCTTGCTTCGTCTTCAAGCACATCTCGGTCATATTGCAGCAGAAGCTTTTTGCTTGAAACTGGCTCTCCACAATCCCCACCAAATATATTTTCTCTCTGA 2007 0.427 MLPSLFGLLAFLGIQLPVVMSDCPLDLTFSNFTLASSICSNQGDRGKCCRYINANIAISVARFVNTTSGLGVPPDASDICLQTISQTLHLYGVVRNATVFCGLGTKIPVNYECKARTTVIEMLQSPRFVEVTKNCKLPLGEEIKCKKCLNSGIGFLHHLGIEDNITLSTCRDASFVALASQVDQKSSIDIASCFFGVQGLLGAPASESSPSLPAPEASPSSVVADSPSQLLIGLPLKEKHHSYHLTIVPGIAIAVTAVAVMMLLVLIVLIRQKSKELDEPDNFGKTSSKALPPSATWKFQEGSSSMFRKFSYKEIKKATEDFSTIVGQGGFGTVYKAHFSDGLVAAVKRMNRVSEQAEDEFCREIELLARLHHRHLVSLRGFCIKKHERFLMYEYMGNGSLKDHLHSPGKTPLTWRTRIQIAIDVANALEYLHFYCDPPLYHRDIKSSNTLLDENFVAKIADFGLAQASKNGSICFEPENTEIWGTPGYIDPEYVVTQELTEKSDIYSFGVLLLEIITGRRAIQDNKNLVEWAQPYMESETRLLELVDPNVRESFDLDQLQTVVSIVGWCTQREGRARPSIKQVLRLLYETSEPMHSEFLQVDEDAECHGNQQRGRRSKGKMLRNEVVFHSGDGRYLASSSSTSRSYCSRSFLLETGSPQSPPNIFSL* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0471 668 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Lan18g0471 668 CDD STKc_IRAK 326 588 - -
Lan18g0471 668 ProSiteProfiles Protein kinase domain profile. 320 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0471 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Lan18g0471 668 SMART serkin_6 320 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0471 668 SUPERFAMILY Protein kinase-like (PK-like) 300 591 IPR011009 -
Lan18g0471 668 Pfam SPARK 21 157 IPR043891 -
Lan18g0471 668 Gene3D Phosphorylase Kinase; domain 1 288 395 - -
Lan18g0471 668 Pfam Protein kinase domain 324 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0471 668 PANTHER OS01G0750732 PROTEIN 6 668 - -
Lan18g0471 668 Gene3D Transferase(Phosphotransferase) domain 1 396 614 - -
Lan18g0471 668 PANTHER BNAC06G02630D PROTEIN 6 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0471 Lan-Chr18 9072950 9077925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0471 23 668 Receptor kinase-like Gene Family AT3G19300 61.231 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Lan18g0471 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0471 - - gmx:100807955 1091.26