Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0453 ATGGATGATGAAGTTGTTCAGCGAGTTTTCCATGAAGGAGGTCGCGATTACATTCAACAACAACCTTCAACTTCTTCTTCTTCTTCCATCCTCCAATCTCTCCCTCTCCATGTGTCTTTTGATCATGGCTATTACTTGTTGGTAAAATCTATCCAAGAACTTCGAGAGAAGAAGGAGGGCATTGTTACAGTTGGCATTGGGGGTCCAAGCGGTTCTGGTAAAACAAGCTTAGCAGAAAAGGTGGCATCTGTTATTGGTTGTACTGTTATATCAATGGAGAATTATCGCGATGGAGTTGATGAAGGGAATGATCTGGATTCTCTAGATTTTAATACCCTGATCAAGAATCTTGAGGATTTGACTAAAGGCAATGACACATTAATCCCAGTGTTTGACTATCCGAAAAAGAGACGTGTTGGCTATAAATCAATACAGAGTGCTTCATCTGGGGTGGTAATAGTTGATGGTACATATGCATTGCATGCCAAACTGCGGTCTCTGCTTGATATTCGAGTTGCTGTGGTAGGTGGTGTTCATTTTAGCTTGCTTTCTAAAGTTCGCTATGACATTGGGGATTCTTGTTCACTGGATTACCTCATAGATAGCATTTTTCCATTATTTAGGAAGCACATTGAGTCAGATCTTCATCATGCACAGTCTCCAGATGAGCATTCAAGTTCTGCATTTCAAGGAACTGAATCCCAAACAGATAATTTTCTTGAAATGTACCTTAGACCGCCTTCGGCTAGTGAAGAGGCTAAGATAAATGATTGGATCAAAGTGCGGCAATCTGGAATAAGATATTATTTATCACTTGGTGATCAGAGGATTGTGGACAAAAATTTCATTATCAGGCCTAAAGCAGAGTTTGAGGTTGGACGGATGACACTGGGTGGATTGCTGGCTCTTGGGTATACCGTTGTGGTTAGTTATAAACGTGCATCCACGACTGTCAATAACGGCAAGGTTTCAATGTCTTTTGAAACCATTGATGCTCTTGGTGAGACATTCATGGTGATGAGAGGAACCAATAGGAAGACCGTTGGAACAGAAGCATTGAGGGTAGGTAACAATGGACCTTGGATTACTAAATCATATCTGGAAATGATTCTCGAGAGAAAAAGTGTACCCCGTCTTAGTACACCACCACTTGTGACTAATGCATCTATGACTGGTAGTCAAGAAACAACAATCATTGCACCAAAGCCAATTCGTGTCACTCCTGACTTTGTTATTGGTCTTGAGGATATATCTCAGCCATGGACTCGATCTCCAACAAAATCTAAAATGGAACCTGTTTTGGCAACATGGCAATTCATATCTTCAGATTCCTCTGAGCCTGACAACTCAGTCCTTGATCCTTCATCTTTCAGGGATACCATTAGGCTTGCTCCAATGCCTGATTCATATGACTTGGATAGGGGATTGCTTTTGGCTGTTCAAGCAATACAAGCTTTGTTGGAGAATAAAGGTGTCCCAATCATAGTTGGAATTGGAGGTCCAAGTGGGTCCGGAAAGACTAGTTTGGCTCATAAAATGGCTAATATCATTGGTTGTGAAGTAGTTTCCCTGGAACACTATTATATACAAGTAAAAGATTTTAAGCATGATGACTACAGCTCTCTTGATTTGTCTTTTCTATCAAAGAATATCGATGACATAAGAAATGCCCGAAGAACAAAAGTGCCTATATTTGACCTGGAAAGTGGTGCCCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGACTGTGGAGTGATTATATTTGAAGGCGTCTATGCTTTGCATCCTGATATCCGAGTATCACTTGACTTGTGGATTGCTGTTGTGGGAGGTGTTCATTCACATTTGATTTCACGAGTTCAAAGGGATAAGAGTAGAGTGGGATGTTTTATTGCCCAAAATGAGATCATGACGACAGTTTTTCCTTTGTTCCAGCAGCACATTGAACCTCATCTTGTTCATGCACATCTTAAAATTCGAAATGACTTTGACCCTGTGCTTTCTCCTGAGAGTTCTTTGTTTGTATTGAAGAGCAACAAGAAAGTAGCTTATCAAGATATTCTTGCAATTCTTGATCCAGCAAAGTTTTGCAGTTCGGTCCAGAAATTTATTGATATTTATATAAGGCTTCCTGGGATCCCTTCTAATGTGCAGTTGACAAATAGTGATTGTATTCGAGTCAGAATATGTGAAGGCAGATTTGCATTGCTGATACGTGAGCCTATTAGAGAAGGGAACTTCATCATTCAGCCTAAAGTGGATTTTGACATTAGCATTAGTACAGTTGCTGGTCTTCTTAATCTTGGGTACCAAGCAGTTGCTTACATTGAAGCATCTGCATTCATATATCAGGATGGAAAGATTCTGATTGAGGTTGATCATCTACAAGACATATCTGACCCATACATTCAGATCAAGGGTGTTGATAAAGATGCAGTGGCAGCAGCTGGTTCAAGGCTTAAATTGGATGGTTCATATACTACCAAGAGTTATCTTGAAATAGTTTTGGAAAGACTACCAGCTATTGAAGGAACTTCTGGTGGGATTCACTCTCAGCAATCGTCAAGGCTGCTAGAGATTATTGAATTTATTCAGTCTCAGGGATGTAGCTCTGCTTCAGAATCTTCATCAAACAGGGTGGTCTCTCCAATTGGAGGGACTATTGAGGAGATGCAATCCAGGATTAGAAGGCTTGAAAGGTGGCTTGCAATAAATACGGTTCTATGGACATTTTTTATGTCTGCCCTCGTTGGCTTTTCACTGTATCAAAGGAGGCGTCAGTGA 2787 0.4062 MDDEVVQRVFHEGGRDYIQQQPSTSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKEGIVTVGIGGPSGSGKTSLAEKVASVIGCTVISMENYRDGVDEGNDLDSLDFNTLIKNLEDLTKGNDTLIPVFDYPKKRRVGYKSIQSASSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIESDLHHAQSPDEHSSSAFQGTESQTDNFLEMYLRPPSASEEAKINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRASTTVNNGKVSMSFETIDALGETFMVMRGTNRKTVGTEALRVGNNGPWITKSYLEMILERKSVPRLSTPPLVTNASMTGSQETTIIAPKPIRVTPDFVIGLEDISQPWTRSPTKSKMEPVLATWQFISSDSSEPDNSVLDPSSFRDTIRLAPMPDSYDLDRGLLLAVQAIQALLENKGVPIIVGIGGPSGSGKTSLAHKMANIIGCEVVSLEHYYIQVKDFKHDDYSSLDLSFLSKNIDDIRNARRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRVSLDLWIAVVGGVHSHLISRVQRDKSRVGCFIAQNEIMTTVFPLFQQHIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILAILDPAKFCSSVQKFIDIYIRLPGIPSNVQLTNSDCIRVRICEGRFALLIREPIREGNFIIQPKVDFDISISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDISDPYIQIKGVDKDAVAAAGSRLKLDGSYTTKSYLEIVLERLPAIEGTSGGIHSQQSSRLLEIIEFIQSQGCSSASESSSNRVVSPIGGTIEEMQSRIRRLERWLAINTVLWTFFMSALVGFSLYQRRRQ* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0453 928 Pfam Phosphoribulokinase / Uridine kinase family 495 660 IPR006083 GO:0005524|GO:0016301
Lan18g0453 928 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 455 579 - -
Lan18g0453 928 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 580 919 - -
Lan18g0453 928 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 2 397 - -
Lan18g0453 928 Gene3D - 492 678 IPR027417 -
Lan18g0453 928 SUPERFAMILY CYTH-like phosphatases 701 835 IPR033469 -
Lan18g0453 928 Gene3D - 46 190 IPR027417 -
Lan18g0453 928 Gene3D - 679 840 - -
Lan18g0453 928 PANTHER URIDINE KINASE 580 919 - -
Lan18g0453 928 PANTHER URIDINE KINASE 2 397 - -
Lan18g0453 928 PANTHER URIDINE KINASE 455 579 - -
Lan18g0453 928 CDD UMPK_like 63 221 - -
Lan18g0453 928 SMART AAA_5 492 636 IPR003593 -
Lan18g0453 928 SMART AAA_5 60 210 IPR003593 -
Lan18g0453 928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 173 IPR027417 -
Lan18g0453 928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 481 663 IPR027417 -
Lan18g0453 928 CDD UMPK_like 495 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0453 Lan-Chr18 8691565 8708863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0453 488 651 PRT Gene Family AT1G55810 25.281 7.46e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0453 - - gmx:100778905 1586.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0453 18 8691565 8708863 Lan1g0154 1 1146565 1154817 PCT