Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0452 ATGGATTCTAGTGGCAGTACCATGCAAACACATTTTGTAGACATAAACGAGGAAGCACCAGAAGCACACCCAGTTGCACCACCACCCAAACAAAGCACCTTACATAGGCTCAAGGTTTGGATTAAGGAAACTTTTTTCCCTGATGATCCTCTTCGCCTATTTAAGGGACAAACACTTCAGAGAAAACTAATACTTGGAGCTCAATATTTGTTCCCTGTTCTTGAATGGGGCCAAAAATACAACCTCAAACTCTTGAAATCTGACCTTATTTCTGGTATCACCATTGCTAGCTTGGCAATCCCTCAGGGAATCAGTTATGCTAAGCTTGCAAACGTTCCTCCAATTCTAGGACTCTATTCTAGTTTTGTTCCACCACTTGTGTATGTTGTTCTTGGAAGCTCAAAGGATCTTGCAGTAGGACCTGTCTCTATTGCTTCTCTTGTAATGGGATCCATGCTCCAAGATGAAGTGTCTCCAAATGAAGACCCTGATTTGTTTCTTAAGCTAGCTTTAACATCAACTCTTTTTGCTGGTCTCTTTCAAGCTGCTCTTGGAATTCTAAGACTAGGATTTATCATTGATTTTCTATCTAAGGCCATTCTTCTGGGGTTCATGGCCGGATCTGCTGTAATTGTCGCTTTGCAACAGCTCAAAAGCATCCTTGGAATCACACATTTCACTAAAAATATGGCCATCATTCCTGTTATGAAATCTGTTTTTCATAAAACAGACGAGTGGTCATGGCAAACAATATTGATGGGGTTTTCCTTCCTAATAGTATTATTACTAGCAAGACACGTGAGCAAAAAGAAACCCAAACTTTTTTGGGTCTCAGCTGGAGCCCCTCTTGTATGTGTCATAATCTCTACCATCCTATCTTTTGCTATTAAGGCTCAACATCATGGCATCAGCGTAATTGGAAAGTTGCCAAAAGGAATAAATCCTCCTTCAACTGATAAGTTGATCTTTAATGGAACTCATCTAGGTCTAGTCATTAAAACTGGCTTTATCACTGGCATTTTATCCCTCACTGAAGGAATTGCAGTAGGAAGAACATTTGCAGCTCTCAGAAACTACAGAGTGGATGGAAATAAAGAAATGATGGCAATTGGGCTAATGAATATGGTTGGCTGCACCACATCTTGCTATGTTACAACAGGATCTTTTTCTCGCTCGGCTGTGAATAATAACGCAGGAGCAAAATCAGCGATGTCAAACGTTATAATGTCATTAGCAGTCATGGTGACACTCCTATTTCTCATGCCATTATTTCATTACACCCCGAATGTTATATTGGGCGCGATCATAATAACAGCAGTGATTGGCCTCATTGATATCCCTGCTGCTTATCTCCTCTGGAAGATAGACAAATTCGATTTCCTTGTGATGTTGGTTGCATTCTTTGGTGTTATTTTTATCTCAGTTCAGTATGGCCTTGCTATTGCAGTCGGGTTGTCAATTTTGAAACTCCTATTGCAAATTACAAGACCTAAAACAGTAATGTTGGGGAACATACCAGGAACAGACATATATAGAGATCTTCATCATTATAAGGAAGCTGCAAGAGTACCTGGTTTTCTTATATTAAGAATAGAGGCTCCAATCAATTTTGTTAATATCACATATCTACATGAGAGGATATTAAGGTGGGTAGAAGAAGTTGAAGAAGATAACATACTGAAAGACTTTAGCCTTCAATTTATGATTCTTGAAATGTCAGCTGTGAGTACCATAGACACAAGTGGAGTCTCACTTTTCAAGGAGTTGAACACAGCATTGCAACATAAGGGTGTTGAGCTTGCATTGGTGAATCCTCTTGCTGAAGTCTTGGTAAAGCTGAGAAAAGCAGATGTTGGTCATAATAACATTCGAGACGATTACCTTTTCGTGACGGTTGGAGAGGCTGTAACTTCACTTTCATCAACATTGAAGACACCAACTGTGAGAGAAGAGGCACAGGAAACTGTGGTTGAATACTAA 1980 0.3975 MDSSGSTMQTHFVDINEEAPEAHPVAPPPKQSTLHRLKVWIKETFFPDDPLRLFKGQTLQRKLILGAQYLFPVLEWGQKYNLKLLKSDLISGITIASLAIPQGISYAKLANVPPILGLYSSFVPPLVYVVLGSSKDLAVGPVSIASLVMGSMLQDEVSPNEDPDLFLKLALTSTLFAGLFQAALGILRLGFIIDFLSKAILLGFMAGSAVIVALQQLKSILGITHFTKNMAIIPVMKSVFHKTDEWSWQTILMGFSFLIVLLLARHVSKKKPKLFWVSAGAPLVCVIISTILSFAIKAQHHGISVIGKLPKGINPPSTDKLIFNGTHLGLVIKTGFITGILSLTEGIAVGRTFAALRNYRVDGNKEMMAIGLMNMVGCTTSCYVTTGSFSRSAVNNNAGAKSAMSNVIMSLAVMVTLLFLMPLFHYTPNVILGAIIITAVIGLIDIPAAYLLWKIDKFDFLVMLVAFFGVIFISVQYGLAIAVGLSILKLLLQITRPKTVMLGNIPGTDIYRDLHHYKEAARVPGFLILRIEAPINFVNITYLHERILRWVEEVEEDNILKDFSLQFMILEMSAVSTIDTSGVSLFKELNTALQHKGVELALVNPLAEVLVKLRKADVGHNNIRDDYLFVTVGEAVTSLSSTLKTPTVREEAQETVVEY* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0452 659 CDD STAS_SulP_like_sulfate_transporter 517 631 - -
Lan18g0452 659 Pfam STAS domain 517 635 IPR002645 -
Lan18g0452 659 PANTHER SULFATE TRANSPORTER 21 644 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan18g0452 659 Gene3D STAS domain 496 641 IPR036513 -
Lan18g0452 659 ProSiteProfiles STAS domain profile. 516 639 IPR002645 -
Lan18g0452 659 PANTHER SULFATE TRANSPORTER 3.3-RELATED 21 644 IPR030313 -
Lan18g0452 659 SUPERFAMILY SpoIIaa-like 522 639 IPR036513 -
Lan18g0452 659 Pfam Sulfate permease family 85 465 IPR011547 GO:0016021
Lan18g0452 659 TIGRFAM sulP: sulfate permease 72 635 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan18g0452 659 ProSitePatterns SLC26A transporters signature. 114 135 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0452 Lan-Chr18 8669076 8675380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0452 17 644 Inorganic Solute Cotransporters AT3G15990 63.968 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0452 K17471 - gmx:100787284 969.148