Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0433 ATGGACGAGGACCAAGAGATGGAGAGGTTTGGAATGGACAATGATTTTGAAGGTGGAGAATGGATTGATGGTGAGTATTACTATCGAAAGCGCAAAGAAAAGCATGCTCAAACCAGAGAAGATGTTCTTTATGGGGTTTTTGCAGACTCAGATGATGATGACGACGAATATTCTAGCAAGAAGCGCAGAAAGGATCGTGGCTTATCTAAGAAGCAAGACCTCACCAAGCCCGTCAATTTTGTCTCTACTGGCACATTCATGCCTAGTCAAGATACTGATAAGAATTCTAAAGAACAGGTTGAAAAGGATAACTGTGTTAGTGAAGATAGGCCGGGTGTAGGTCTCGGCATGGGGTCTGGTAGCATTTCCAGATCTGGTTTAGGTTTTAATTCCAGTTATACTGCAAATGGTTCTGATAGAAACAATGATTTTAATGAGAATGACGATGATAACTTTCTGCCTACAGTACCTACTGCATTTGGAAAGAAGATTAAGGAAGGGGCAATGAGAAGGGAAAAGGAAAGGGAGAGAGAAAAAGTGGATAAGAGGAGGGGTCAACATCAAAGTCTAGGTAAAGATGTCGATGTTGGGAAATTTGAGAAGCATACGAAGGGAATAGGGTTGAAGCTATTGGAGAAGATGGGTTATAAAGGTGGTGGTCTTGGGAAGAATGAGCAAGGTATTGTGGCTCCTATTGAAGCGAGATTGAGGGCCAAGAATACTGGTATTGGATTTAACGACTCTAAGGAGATTATGCCATTGCAGCCTGCTTTGAAGGTAGAGAACAATAGTTTACCTGGAATCAACCAATCTACTGCTGGGCGAACAAAAGACAGACCATGGTCAAAGCACGCAAGGTTGAAGAAGAAGAAAACAAGCAAGGCTGAAGAAGAGGAAGACTATATTACTGCACAGGAGTTGTTGGAAAGCAAGCAAGAACAAGACTCAGAGGTTGTTCAGAAGGTTTATGATATGAGGGGGCCACAGGTTCGAGTAATTACAAATTTGTCTGATTTGAACGCTGAGGAAAAAGCAAGGGAAAATGATGTTCCAATGCCAGAACTTCAACATAGTATAGGGTTAATAGTTAGGTTGGCCGAAGCTGATATCCAAGAGATTGATAGAAATTTGAGGAGGGAGAGGGAAACAGCACTTAGCTTGAAGAAAGACAAAGAGAAGTTAGAAATTGAGACTGCATTTAAAAAGAAGCAGGTGGATATCATGGAGGAAATACTGGGTGTGTTGGACCAAATGGAAAAAGAGAACAATATAGGAACATTAACATTGGATTCCCTTGCTCAAAGCTTTAGTGACTTGCATAAAAGATATGCTGATACCTATAAGTTATGTAACTTGTCATGTATTGCTTGCTCATATGCTTTACCTCTGTTTATCAGAGTTTTTCAAGGATGGGATCCTCTTCGAAATCCATATCATGGGATAGAATTGGTATCATTTTGGAAGACGTTGCTACAAGAAGAAGATTGCCTTGATATATGGGATGCATCATCGCCTTACACCCAATTGGTTTCTGAGGTTGTATTGCCAGCTGTTAGAATATCTGGTATCAATACCTGGCAAGCACGGGATCCTGAGCCGATGTTACGGTTTCTAGAGTCATGGGAAAAGTTGCTTCCTTCTTCTGTCCTCACTACAATATTGGACAATATAGTCATGCCAAAATTGTCAAGTGCTGTAGAAGCTTGGGAACCTCATCATGAAACAATTCCCATTCATACTTGGGTGCATCCATGGCTTCCTCTGCTAGGACACAAATTGGAGGATGTGTACCAGGGGATTCGTTTTAAATTGAGTACTGTTCTCGGTGCCTGGCACCCAAGTGATGGTTCTGCCTATGCTATATTGTCTCCTTGGAAGCCTGTATTTGATCCTGCAAGTTGGGAACAGCTCATGCTTCGTTTCATTGTGCCGAAGTTGCAGCTTGTCTTGCAAGATTTCCAAGTGAACCCGGCAAGTCAGAATCTTGATCAATTTTTTTCAGTAATGAACTGGGCTTCTGCTATTCCAATTCATCTGATGGTTGATATGATGGAGAAAATTTTCTTCGCCAAGTGGCTTCAGGTTCTGTATCATTGGTTGTGCTCAAGTCCTAATTTTGAGGAAGTTACAAAATGGTATTTGGGTTGGAAAGAACTAATTCCAAAAGAACTTTTGGCAAATGAAAGTATTCGGTATCAGCTTAACTGTGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGCAGGTGGTTCAACCTGGTTTAAAAGAGAATATCAGCTATCTTAGGGTACTCGAGCAAAGGCAATTTGAAGCACAGCAGAAAGCAGCAGCGAATGCTCAACACCAAGCTGCTGCAAGCTTAGGCAGTGCTGTCAATGTTGATGGTGTGGCCAGCATGCAATCACATGAGTTGACCTTGAAAGAAGTTATCGAGGCCCACGCTCAGCAACATGGTTTGCTATTCAAGCTTAAACCTGGAAGAATGCACAATGGTCATCAAATATATGGGTTTGGTAATATCAGCATAGTAATAGACTCTCTAAACCAAAAGGTATATGCCCAAAATGAGGACTCATGGTCTTTGGAATCTCTCCAAGGCTTGCTAGAGTTGAACAACAAGTCTCATAGCAAAAGACGCTGA 2643 0.4162 MDEDQEMERFGMDNDFEGGEWIDGEYYYRKRKEKHAQTREDVLYGVFADSDDDDDEYSSKKRRKDRGLSKKQDLTKPVNFVSTGTFMPSQDTDKNSKEQVEKDNCVSEDRPGVGLGMGSGSISRSGLGFNSSYTANGSDRNNDFNENDDDNFLPTVPTAFGKKIKEGAMRREKEREREKVDKRRGQHQSLGKDVDVGKFEKHTKGIGLKLLEKMGYKGGGLGKNEQGIVAPIEARLRAKNTGIGFNDSKEIMPLQPALKVENNSLPGINQSTAGRTKDRPWSKHARLKKKKTSKAEEEEDYITAQELLESKQEQDSEVVQKVYDMRGPQVRVITNLSDLNAEEKARENDVPMPELQHSIGLIVRLAEADIQEIDRNLRRERETALSLKKDKEKLEIETAFKKKQVDIMEEILGVLDQMEKENNIGTLTLDSLAQSFSDLHKRYADTYKLCNLSCIACSYALPLFIRVFQGWDPLRNPYHGIELVSFWKTLLQEEDCLDIWDASSPYTQLVSEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLTTILDNIVMPKLSSAVEAWEPHHETIPIHTWVHPWLPLLGHKLEDVYQGIRFKLSTVLGAWHPSDGSAYAILSPWKPVFDPASWEQLMLRFIVPKLQLVLQDFQVNPASQNLDQFFSVMNWASAIPIHLMVDMMEKIFFAKWLQVLYHWLCSSPNFEEVTKWYLGWKELIPKELLANESIRYQLNCGLDMMNQAVEGMQVVQPGLKENISYLRVLEQRQFEAQQKAAANAQHQAAASLGSAVNVDGVASMQSHELTLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNISIVIDSLNQKVYAQNEDSWSLESLQGLLELNNKSHSKRR* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0433 880 MobiDBLite consensus disorder prediction 75 93 - -
Lan18g0433 880 ProSiteProfiles G-patch domain profile. 203 248 IPR000467 GO:0003676
Lan18g0433 880 Pfam GC-rich sequence DNA-binding factor-like protein 429 696 IPR022783 -
Lan18g0433 880 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 7 866 IPR045211 GO:0000390
Lan18g0433 880 MobiDBLite consensus disorder prediction 164 190 - -
Lan18g0433 880 Pfam Tuftelin interacting protein N terminal 4 103 IPR022159 -
Lan18g0433 880 PANTHER TUFTELIN-INTERACTING PROTEIN 11 7 866 - -
Lan18g0433 880 MobiDBLite consensus disorder prediction 54 72 - -
Lan18g0433 880 Coils Coil 294 314 - -
Lan18g0433 880 MobiDBLite consensus disorder prediction 33 120 - -
Lan18g0433 880 Coils Coil 363 397 - -
Lan18g0433 880 MobiDBLite consensus disorder prediction 263 296 - -
Lan18g0433 880 MobiDBLite consensus disorder prediction 94 108 - -
Lan18g0433 880 MobiDBLite consensus disorder prediction 138 157 - -
Lan18g0433 880 PIRSF TFIP11 1 875 IPR024933 -
Lan18g0433 880 SMART G-patch_5 201 246 IPR000467 GO:0003676
Lan18g0433 880 Pfam G-patch domain 203 244 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0433 Lan-Chr18 8338967 8342492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0433 206 244 C2H2 Transcription Factor Family AT5G26610 53.846 1.71e-07 52.0