Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0432 ATGAAAGAGAGTGGTAGAAAGCAGAGTGGTGGAGCCTCATCACCATGTGCTGCATGCAAGCTTCTAAGGAGAAGGTGTTCACAAGATTGTGTTTTTGCTCCTTATTTCCCATCTCATGAGCCACACAAGTTTGCAAATGTACATAAAGTCTTTGGTGCAAGCAATATCAACAAGATGCTTCAGGAACTACCAGAGCATCAAAGAGGAGATGCAGTGAGTAGCATGGTGTATGAGGCAAATGCAAGAGTTAAGGATCCTGTGTATGGCTGTGTTGGGGCAATCTCTTCTCTCCAGCAACAAATTAATGTCCTACAAACCCAATTGGCTGTGACCCAGGCTGAGGTTGTGCACCTTAGGGTGACCCACAATGCTTCATCATCCAATAGTGAGTCTCCATCATCCAATATCATGGACTCACAAGCCAAGTATTTTTTTGAAATGGATATGGTTGTGGTGGACCATGCTAGCTATGGTGATTCAATGTGGTCATGCTAA 495 0.4404 MKESGRKQSGGASSPCAACKLLRRRCSQDCVFAPYFPSHEPHKFANVHKVFGASNINKMLQELPEHQRGDAVSSMVYEANARVKDPVYGCVGAISSLQQQINVLQTQLAVTQAEVVHLRVTHNASSSNSESPSSNIMDSQAKYFFEMDMVVVDHASYGDSMWSC* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0432 164 Pfam Lateral organ boundaries (LOB) domain 15 112 IPR004883 -
Lan18g0432 164 Coils Coil 94 114 - -
Lan18g0432 164 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 140 - -
Lan18g0432 164 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 140 - -
Lan18g0432 164 ProSiteProfiles LOB domain profile. 14 115 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0432 Lan-Chr18 8333574 8346087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0432 1 164 AS2 family AT1G31320 66.851 1.23e-71 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan18g0432 LOB 1.4e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0432 - - tcc:18596365 256.914