Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0428 ATGAAGTTGAGAACAGAAACCACCCTCCTAATTTTTCCTCTATTGGCGTTGTTTTTTTGCGTCCCTTTTTCTTATTCTTCAATACCCAATGACCCATTTCTCGGAATTTCTCCTCAAGATGAAAAGTATTACAAGTCTTCTGATGTAATAAAATGCAAAGATGGATCTGCAAAATTCACTAAAGAACAGCTTAATGATGATTTCTGCGATTGCCTTGATGGCACTGATGAGCCTGGTACATCAGCATGTCCGGGTGGAAAATTTTATTGTGGGAATGCAGGACATGTCCCTGTTTACCTCTTTTCATCAAGAGTGAACGATGGAATATGCGATTGCTGTGATGGAACCGATGAATATGATGATAAAGTGAAGTGCCCAAATACTTGCTGGGAGGCTGGGAAAGTTGCTCGAGAGAAGCTGAAGAAAAAGATTGACACGTATCAAGAGGGTGTTAAATTGCGAAAGCAAGAAATTGAACAAGCTAAATTAGCTATGGAGAAGGATCAGGCAGAACTTTCAAAATTGGAAAAAGAAGAAAGTACACTTAAAGGGCTTGTGCAACAGCTAAAGGAGCATAAAGAACAAATAGAGAAGGCAGAGGAGAAGGAGCGTTTACAGAAGGAAAAAGAAGAGAAGCAGAAAAGGGAGGCAGAGGAGAAAGCTAATGGGGTAAATATTAAAGCTGGTGAAGAGGATACTGGGCATGGAAATGAAGATGGAAAACATTTGGAAGTTGAAGACAATGATGTCACAGATAACCATGACAAAACTGGAACTCTAGATGATTCTTCGGCAGATCAGGTTGAAGCTGGGGAAAAGTTAGCAAATGCACATGACAATGATGATGGAGCCACTGATAGTCCTGGACATGAAGGATCTTTGCTTGATGAAGAGGAAGAGATTGCAAAGGAAGCTGATGGGGAATCTGGTTTTAAATCTGATGCTGATGACAATGTTAAGGTTGAAAAGAAAGATTCATCTGATGAAATCATCAATGAGGGACATGATGTATCTGAAAATACAGAGGGATTATCAAAGGAAGAATTGGGCCGGCTTGTTGCTTCTCGGTGGACAGGAGAAAATACTGATAAGCAAAGTGCCGAAGCTGATACCACATCAGACAATGAAGATCTGGAAGATATTCCAGATGAGACACATAATGTTGAACATGATGGCTATGCTTCTGACACTGATAACGACAGCAGCAAATATGAAGAAGATGAAATTGATGAAGACTTTCGAGAGGACGAGCATGATGACCATAGTTCCTCCTACAAATCAGACACTGAAACTGAACCAGACTTGTCAGATGCTGCTCATGTACGCAAGGAATATGACGAGTCAAGTACCAAGTTGTCTAAAATACAGTCTAGAATATCCAGTCTGACGCAAAAGCTAAAACAAGATTTTGGTCCAGCGAAGGAGTTTTATTCATTCTATGGTCGCTGCTTCGAGAGCAAGCAGAACAAGTACACTTACAAAGTCTGCCCTTATAAACAGGCTTCCCAGGAGGAGGGTTATTCCACCACCCGTTTGGGGCGCTGGGATAAATTTGAGGACTCATACAGAGTAATGGTGTTTGCTAATGGTGATAAATGCTGGAATGGTCCTGATAGGAGTTTGAAGGTCAAGCTAAAATGTGGGTTGAAAAACGAGGTTACTGATGTAGCCGAACCCAGCCGTTGCGAATACGTAGCTTTATTATCTACCCCAGCCCTTTGTCAGGAGGAAAAGCTGAAGGAGTTACAACAAAAGCTGGAGTTGTTGAATTCGGAACAGCCCGAAAAGCACGACGAGTTGTGA 1803 0.4154 MKLRTETTLLIFPLLALFFCVPFSYSSIPNDPFLGISPQDEKYYKSSDVIKCKDGSAKFTKEQLNDDFCDCLDGTDEPGTSACPGGKFYCGNAGHVPVYLFSSRVNDGICDCCDGTDEYDDKVKCPNTCWEAGKVAREKLKKKIDTYQEGVKLRKQEIEQAKLAMEKDQAELSKLEKEESTLKGLVQQLKEHKEQIEKAEEKERLQKEKEEKQKREAEEKANGVNIKAGEEDTGHGNEDGKHLEVEDNDVTDNHDKTGTLDDSSADQVEAGEKLANAHDNDDGATDSPGHEGSLLDEEEEIAKEADGESGFKSDADDNVKVEKKDSSDEIINEGHDVSENTEGLSKEELGRLVASRWTGENTDKQSAEADTTSDNEDLEDIPDETHNVEHDGYASDTDNDSSKYEEDEIDEDFREDEHDDHSSSYKSDTETEPDLSDAAHVRKEYDESSTKLSKIQSRISSLTQKLKQDFGPAKEFYSFYGRCFESKQNKYTYKVCPYKQASQEEGYSTTRLGRWDKFEDSYRVMVFANGDKCWNGPDRSLKVKLKCGLKNEVTDVAEPSRCEYVALLSTPALCQEEKLKELQQKLELLNSEQPEKHDEL* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0428 600 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 9 438 IPR039794 -
Lan18g0428 600 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 434 600 IPR039794 -
Lan18g0428 600 Pfam Glucosidase II beta subunit-like protein 442 599 IPR036607 -
Lan18g0428 600 MobiDBLite consensus disorder prediction 197 454 - -
Lan18g0428 600 PANTHER BNACNNG14010D PROTEIN 434 600 - -
Lan18g0428 600 PANTHER BNACNNG14010D PROTEIN 9 438 - -
Lan18g0428 600 ProSiteProfiles MRH domain profile. 481 576 IPR044865 -
Lan18g0428 600 MobiDBLite consensus disorder prediction 416 451 - -
Lan18g0428 600 MobiDBLite consensus disorder prediction 383 400 - -
Lan18g0428 600 SUPERFAMILY Mannose 6-phosphate receptor domain 486 574 IPR009011 -
Lan18g0428 600 Coils Coil 572 599 - -
Lan18g0428 600 Pfam Glucosidase II beta subunit-like 30 178 IPR028146 -
Lan18g0428 600 Coils Coil 151 227 - -
Lan18g0428 600 MobiDBLite consensus disorder prediction 401 415 - -
Lan18g0428 600 Gene3D - 476 574 IPR009011 -
Lan18g0428 600 MobiDBLite consensus disorder prediction 305 346 - -
Lan18g0428 600 MobiDBLite consensus disorder prediction 197 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0428 Lan-Chr18 8292591 8300272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0428 24 600 Calmodulin-binding Proteins AT5G56360 58.173 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0428 K08288 - gmx:100807083 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0428 18 8292591 8300272 Lan6g0863 6 8043645 8052954 LSH