Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0419 ATGGGTGGTGCAGGAACATTTGTTCAAGCCATTCGTCGCTTGTTTAATCCACAACAACGTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAACAACATGTTTCTAATAATAACAATGCCATTTTTGTTAATGATTTGAGTTCTCAATTACCCACTAATCCTAATCAGGAAACTGATCTTGCCCTTGACGGAGATTTTGATTACTCTGCTTTGAAGCATATTAAAGTTCCTACGTGTAACCTCTTTGCTCCTGATTTTTCCATGGATCCTCATAAAAAGGGTGCGCAAGAAGTGGAGTTTTTTACTGAGTATGGAGAGGCAAGTCGATACCAGATCCTAGAAGTCGTTGGGAAAGGAAGTTATGGTGTTGTGGGTTCTGCTGTTGACACTCATACTGGTGAAAAGGTTGCAATCAAGAAAATTAATGATGTTTTTGAACATGTATCAGATGCCACACGGATCCTAAGAGAAATTAAACTCCTTCGGTTGCTCAGACATCCTGATATTGTAGAAATTAAGCATATTATGCTTCCTCCTTCCCGACGAGAGTTTAAGGATATCTATGTTGTGTTTGAGTTGATGGAATCTGACCTTCATCAAGTAATTAAGGCAAATGATGATCTTACTCCTGAGCACCACCAATTTTTCTTGTACCAACTTCTTCGGGGCCTGAAATATATACATGCAGCAAATGTATTTCATCGTGATTTGAAGCCAAAAAATATTCTTGCTAATGCTGATTGCAAACTAAAGATATGTGATTTCGGGCTTGCTCGAGTTTCTTTTAATGATGCTCCATCCGCTATATTCTGGACTGACTATGTTGCAACTCGGTGGTACCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACTCCCGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAGATGCTCACTGGGAAGCCGTTATTTCCTGGAAAAAATGTGGTGCACCAATTGGACCTCATGACTGATTTGCTTGGAACTCCTCCTGCCGAGTCTATTGCAAGGATTCGAAATGAGAAAGCTAGAAGGTATCTTAGCAGCATGCGAAAAAAGCAACCAGTTCCATTGTCTGAAAAATTTCCAAATGCAGATCCGTTGGCTCTTTCTACGCTGGAGCGCCTACTTGCATTTGATCCTAAAGACCGTCCAACAGCTGAAGAGGCATTAGCCGATCCTTATTTCAATGGTTTGTCAAATATTGATCGTGAACCATCCACTCAACCCATTTCAAAACTTGAGTTTGAGTTTGAGAGAAGGAAATTGACGAAAGATGATGTTAGAGAGTTGATTTATAGAGAGATTTTGGAGTATCATCCCCAGATGCTTCAGGAATATCTTCGTGGTGGAGATTTAACCAGCTTTATGTATCCAAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAGGAGCATTATGGCAAAGGTGAGGGCGGCACCCCATTACAGAGACAGCATGCCTCTTTGCCTAGGGAGCGAGTTGTTTCTTCCAAGGATGAAAGTAATCAAAACAACGACTTTGAAAAACCAACTGGATCAAATCTTCAGAGTCCCCCAGCGTCGGATGCGACGGATGCTGGAAATACACAAAATGGACACTCCAAGCCAAGCAACAGCGCACGTAGCTTGCTGAAGAGTGCCAGCATCAGTGGTTCAAAGTGTATAGGTGTGAAACAAAGTAAAGATCAAGAGGCGGAGTCAATTACGGAGATCCGTGACGAGGCAGTAGATGAATTGACAGAGAATCTTGCTTCTCTCCATACTTAG 1788 0.4161 MGGAGTFVQAIRRLFNPQQRSSSSSSSSSQQHVSNNNNAIFVNDLSSQLPTNPNQETDLALDGDFDYSALKHIKVPTCNLFAPDFSMDPHKKGAQEVEFFTEYGEASRYQILEVVGKGSYGVVGSAVDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHAANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPPAESIARIRNEKARRYLSSMRKKQPVPLSEKFPNADPLALSTLERLLAFDPKDRPTAEEALADPYFNGLSNIDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGDLTSFMYPSGVDRFKRQFAHLEEHYGKGEGGTPLQRQHASLPRERVVSSKDESNQNNDFEKPTGSNLQSPPASDATDAGNTQNGHSKPSNSARSLLKSASISGSKCIGVKQSKDQEAESITEIRDEAVDELTENLASLHT* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0419 595 ProSiteProfiles Protein kinase domain profile. 109 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0419 595 MobiDBLite consensus disorder prediction 480 552 - -
Lan18g0419 595 SUPERFAMILY Protein kinase-like (PK-like) 104 405 IPR011009 -
Lan18g0419 595 CDD STKc_TDY_MAPK 108 445 - -
Lan18g0419 595 ProSitePatterns MAP kinase signature. 144 247 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lan18g0419 595 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 75 534 - -
Lan18g0419 595 Pfam Protein kinase domain 109 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0419 595 Gene3D Phosphorylase Kinase; domain 1 125 446 - -
Lan18g0419 595 MobiDBLite consensus disorder prediction 513 552 - -
Lan18g0419 595 Gene3D Transferase(Phosphotransferase) domain 1 195 423 - -
Lan18g0419 595 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 75 534 - -
Lan18g0419 595 SMART serkin_6 109 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0419 595 ProSitePatterns Protein kinases ATP-binding region signature. 115 139 IPR017441 GO:0005524
Lan18g0419 595 MobiDBLite consensus disorder prediction 498 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0419 Lan-Chr18 8124893 8130213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0419 1 594 MAP Kinase Gene Family AT1G73670 72.000 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lan18g0419 Pkinase 3.2e-67 CL0016