Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0411 ATGGATGATGGGTACAGAAGAAAGGCCAAGATTGCAATGGTCGCATTTGTAACGCTTGCTTCGCTTGCCGTTTTTGCTTTGCTTGTTGCTTTCACTTACTACTGCTACATTCACTACAAGGTTCTCAAGCGTCGCAAATCCCAAAAAGTTGAAGATGGTAACATTAACGAGAAAAGGGACTTTGCAAGTCTGCAAGTGGTTGCTGATAAAGGACTTCAGGTGTTCACTTTCAAGCAGCTACATTCAGCAACTGGTGGCTTCAGCAAGTCCAATGTGGTTGGCCATGGAGGTTTCGGACTTGTTTATCAGGGAGTGCTAAATGATGGCAGGAAGGTTGCAATTAAGTTCATGGATCAGGCAGGAAAGCAAGGAGAAGAAGAATTTAGAGTAGAGGTGGAATTGCTGAGTCGGTTGCATTCTCCTTATTTGCTCGCATTGTTTGGGTACTGCTCCGATAGTAATCATAAATTGTTGGTGTATGAGTTTATGGCAAATGGTGGTCTGCAGGAACATCTTTATCCTATCAGCAATTCTAATGTCACACCCGTGAAGTTGGATTGGGAAACTCGATTACGAATAGCACTTGAAGCTGCTAAGGGTTTGGAATATCTTCATGAACATGTCAGCCCCCCAGTGATTCACAGAGATTTTAAGAGCAGCAACATCCTCTTGGATAAAAAATTTCATGCAAAAGTTTCTGATTTTGGACTTGCGAAGCTTGGACCTGATAGAGCTGGTGGACATGTTTCAACTAGGGTTTTAGGCACCCAGGGATATGTTGCACCTGAATATGCACTAACAGGACACTTAACAACAAAATCCGATGTGTATAGTTATGGTGTTGTACTTCTAGAGCTACTTACTGGCCGAGTGCCAGTCGATATGAAGAGACCTCCAGGGGAAGGCGTTCTCGTTTCTTGGGCTTTGCCCCTGTTGACTGATAGAGAAAAGGTTGTAAAGATTATGGATCCTGCATTGGAGGGACAATACTCAATGAAAGAGGTTATCCAGGTAGCGGCTATTGCTGCAATGTGTGTGCAACCGGAGGCCGATTATCGGCCACTCATGGCAGATGTCGTGCAGTCATTGGTTCCGTTGGTAAAGACTCAAAGATCCACCTCAAAGGTTGCCACTTGCTCTAGTTTCCATTCCCCTAAGTAG 1161 0.4436 MDDGYRRKAKIAMVAFVTLASLAVFALLVAFTYYCYIHYKVLKRRKSQKVEDGNINEKRDFASLQVVADKGLQVFTFKQLHSATGGFSKSNVVGHGGFGLVYQGVLNDGRKVAIKFMDQAGKQGEEEFRVEVELLSRLHSPYLLALFGYCSDSNHKLLVYEFMANGGLQEHLYPISNSNVTPVKLDWETRLRIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKKFHAKVSDFGLAKLGPDRAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVLVSWALPLLTDREKVVKIMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKTQRSTSKVATCSSFHSPK* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0411 386 Gene3D Transferase(Phosphotransferase) domain 1 163 382 - -
Lan18g0411 386 Gene3D Phosphorylase Kinase; domain 1 47 162 - -
Lan18g0411 386 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Lan18g0411 386 PANTHER OS01G0750732 PROTEIN 3 384 - -
Lan18g0411 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Lan18g0411 386 SUPERFAMILY Protein kinase-like (PK-like) 70 363 IPR011009 -
Lan18g0411 386 Pfam Protein kinase domain 88 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0411 386 ProSiteProfiles Protein kinase domain profile. 87 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0411 386 CDD STKc_IRAK 93 366 - -
Lan18g0411 386 PANTHER OS07G0227300 PROTEIN 3 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0411 Lan-Chr18 7857173 7861853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0411 2 384 Receptor kinase-like Gene Family AT3G58690 77.546 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lan18g0411 Pkinase 7.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0411 - - gmx:100804893 690.649