Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0408 ATGGAGGAGACACAAGAAGATGTTGGGGCAGTGGAGCAAGGGCCATCTAATGTATCATGGTGGCCTTCAAATTTCGTTGAAAGATTTGGATCTGTTTCTTTGAATTCTCAAGATGAGACCATAATTAATAAAGGATTTCCTCGACATTCCGACAAAGATGTTTTGTCACCTCAGAAAGCATCACAAATTCTCTGGCGCACTGGAGTGCTTTTAGAACCAATACCAAATGGCTTTTATTCAGTGATTCCGGAGACAAGACTCAAAGAACATTTTGATAGCATTCCTACCTTGGACGAGCTTCATGGTTTTGGTGCAGAGGGTTTTAGGGCTGATATCATTCTTGTGGATTCAGAGAAAGATAAAAAGTTGTCCATGTTGAAGCAATTGATTGCAGCATTGGTTAAAGGACTAAACTCAAATCCAGCTGCAATAATTAAGAAGATAGCTGGATTAGTTTCTGATTTTTATAAGCGATCCAATGTGGACAGTCCAGCAAAAGCTGCACTAGATGAAACCTCTCACATGTTTGAGAGTCAAGGTGTGCAGATGCTGGGAAAAATAAAGCATGGTTCATGTCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTAGGTCTTGAAAGCAAGCTCGTGGTGGGCTTGCCAAACGATGGGACTGTTGAATGTGTAGACTCATACAAGCATATGTCTGTGGTAGTTGTATTAAATTCTGTGGAAATGCTGGTTGATCTTATGCGATTTCCGGGCCAATTATTACCACGGTCAACCAAGGCAGTTTTTATGACTCATATTTCCGCAGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCTTCAATAGAACCAAATAGTCCTTTATATGGTGTTTCTGAGAGCGTTGAGGAGGAAAACCTCCAATTCCATAGGAAATTTGAGGCGTCTGCAAATATATCAGGGATTTCCTTGCGAAATATGATGCTACGATCAAATAGCTTCGTGGACAGGAAATTGAGTCCTGAACATCCATCATTTCGAGCACGTGCACGGTCCATGCTAGGTGGGGATAGGACAGCATTTAGAGCGTTTGCTGATGACCAGGCTACATCAAGATCCAGCTATAGGTCTGATGGTGCACCCTCATCCGAAGCGCGTAGGATACGAAGAAGAAGCATCAGCATTACACCAGAGATAGGTGATGATATCGTAAGGGCTGTACGGGCAATGAATGAAACACTGAAGCAAAATCGTCTACTGAGAGGGGATAATAGCTCATACTCCCATTCTCCAAACAGTGGAACTAGTGATGCAAATCTTCAAAAAAATCTGCCAAGTTTCAATCGTGATGGTTACAATGGAAGTTCCGCCTTATATTCTCGTCAGCTTGGCCAAGTAACTTCACAAACGGCAATGTCATTACCATCTTCACCACATGATTATGGAGGTCAAGCTTCTGATAGAAGTGGGCCATCAGGACAGGGAATGAATGATGAAATGGAGTCGACTTGGAATAGAGTCCTTGAGTCACCAATGTTCAACAATAAACCTCTTTTACCATATGAAGGATGGAATATTGATTTCTCAGAATTAACTGTTGGAACCCGTGTGGGGATTGGGTTCTTTGGTGAAGTCTTCCGTGGCATATGGAATGGCACAGAGGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTTCCGAAAACATGGAAGATTTCTGCAATGAGATATCCATTCTCAGCCGGCTCCGACATCCTAATGTTATCTTATTTCTTGGTGCTTGCACAAAGCCTCCACGTTTGTCAATGGTTACAGAGTATATGGAGATGGGATCATTGTATTACTTGATGCATTTGGGTGGTCAAAAGAAAAGGCTTAGTTGGCGGAGAAGACTAAAGATGTTGCATGACATATGCAAGGGGTTGATGTGCATACACCGAATGAAGATTGTTCACCGTGATCTGAAAAGTGCAAACTGTCTAGTGAATAAGCACTGGGCCGTGAAAATATGTGATTTTGGCCTTTCAAGAATAATGACAGATTCTCCTATAAGAGATTCTTCATCGGCTGGAACTCCAGAATGGATGGCTCCTGAACTTATCCGAAATGAACCTTTCACTGAAAAATGTGATATCTTTAGCTTCGGGGTGATAATGTGGGAGCTCTGCACCTTGAGCAGACCATGGGAAGGTGTTCCACCTGAGAGGGTGGTTTATTCCGTCGCTAATGAGGGTTCCAGATTGGAGATTCCGGAAGGCCCACTAGGCAGGCTGATTTCAGAATGTTGGGCAGAACCACAGGAGCGGCCAAGTTGTGAGGAGATTCTTTCTCGCTTGGTGGACATTGAGTACTCATTGTGCTGA 2349 0.4274 MEETQEDVGAVEQGPSNVSWWPSNFVERFGSVSLNSQDETIINKGFPRHSDKDVLSPQKASQILWRTGVLLEPIPNGFYSVIPETRLKEHFDSIPTLDELHGFGAEGFRADIILVDSEKDKKLSMLKQLIAALVKGLNSNPAAIIKKIAGLVSDFYKRSNVDSPAKAALDETSHMFESQGVQMLGKIKHGSCRPRAILFKVLADTVGLESKLVVGLPNDGTVECVDSYKHMSVVVVLNSVEMLVDLMRFPGQLLPRSTKAVFMTHISAAGESDSAENDSCDSSIEPNSPLYGVSESVEEENLQFHRKFEASANISGISLRNMMLRSNSFVDRKLSPEHPSFRARARSMLGGDRTAFRAFADDQATSRSSYRSDGAPSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLRGDNSSYSHSPNSGTSDANLQKNLPSFNRDGYNGSSALYSRQLGQVTSQTAMSLPSSPHDYGGQASDRSGPSGQGMNDEMESTWNRVLESPMFNNKPLLPYEGWNIDFSELTVGTRVGIGFFGEVFRGIWNGTEVAIKVFLEQDLTSENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLMHLGGQKKRLSWRRRLKMLHDICKGLMCIHRMKIVHRDLKSANCLVNKHWAVKICDFGLSRIMTDSPIRDSSSAGTPEWMAPELIRNEPFTEKCDIFSFGVIMWELCTLSRPWEGVPPERVVYSVANEGSRLEIPEGPLGRLISECWAEPQERPSCEEILSRLVDIEYSLC* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0408 782 MobiDBLite consensus disorder prediction 412 442 - -
Lan18g0408 782 Gene3D Phosphorylase Kinase; domain 1 519 604 - -
Lan18g0408 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Lan18g0408 782 PRINTS Tyrosine kinase catalytic domain signature 600 613 IPR001245 GO:0004672|GO:0006468
Lan18g0408 782 PRINTS Tyrosine kinase catalytic domain signature 639 657 IPR001245 GO:0004672|GO:0006468
Lan18g0408 782 PRINTS Tyrosine kinase catalytic domain signature 686 696 IPR001245 GO:0004672|GO:0006468
Lan18g0408 782 PRINTS Tyrosine kinase catalytic domain signature 705 727 IPR001245 GO:0004672|GO:0006468
Lan18g0408 782 Pfam Protein tyrosine and serine/threonine kinase 527 774 IPR001245 GO:0004672|GO:0006468
Lan18g0408 782 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Lan18g0408 782 ProSiteProfiles Protein kinase domain profile. 526 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0408 782 MobiDBLite consensus disorder prediction 360 386 - -
Lan18g0408 782 ProSitePatterns Protein kinases ATP-binding region signature. 532 553 IPR017441 GO:0005524
Lan18g0408 782 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 335 780 - -
Lan18g0408 782 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 29 335 - -
Lan18g0408 782 MobiDBLite consensus disorder prediction 462 494 - -
Lan18g0408 782 Gene3D Transferase(Phosphotransferase) domain 1 605 780 - -
Lan18g0408 782 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 335 780 - -
Lan18g0408 782 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 29 335 - -
Lan18g0408 782 SMART serkin_6 526 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0408 782 CDD STKc_MAP3K-like 532 774 - -
Lan18g0408 782 SUPERFAMILY Protein kinase-like (PK-like) 499 774 IPR011009 -
Lan18g0408 782 MobiDBLite consensus disorder prediction 361 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0408 Lan-Chr18 7740997 7773806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0408 1 782 MAP Kinase Kinase Kinase AT3G58640 66.343 0.0 1093
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Lan18g0408 PK_Tyr_Ser-Thr 7.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0408 - - gmx:100810612 1330.85