Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0406 ATGACTATAGATTCCCTCGCCGAAGCTCTGCCGTCAGCCTGCTGGTCCGAGACTGCCACCTTCACCCTCATCGACGCCTGGGGCAAACGTTACCTACATCTCAACCGCGGTAACCTTCGCCAGAAGCAGTGGCAAGAAATCGCCGGCACCGTCAACCGCCGCCACGGCCACCGCCGCACCGAGGTCCAGTGCAAGAACCGCCTGGACACGCTCAAGAAGAAATTCAAAATCGAGAAGGCTAGGGTTTCCGAGTTCAACGGCGGCGGTTATGACGGCGCATGGCCGTTCTTTCACCGCCTCAATTTCCTCATCGGTGATAATTATCCGTCACATAGACCATCGCCGGCGGTAAGACGCCACCGAGAAATACGACCACCGGCAAAGTTCCCAGAATGGGCACTTCCTCCTGCCGGTCGTCGATCCGACACTCAAAAGCGGCAATCAGCGCTTCTGAATTCATACTTCAGCCGTAATTTATCGGCCTTTGCCGCAGCAGCGGCCGTGGTAGCGAAAGAGGAAGAGGGAGAGAATTTGAATAGGTGGAAGTTGAGGAATGAAAGTGAGAAAAGGAAGAGAGTAAAAGAGAGTGATAATGAGGATTGTGAGACTGTGTGTAAAAAAGTGGCACTTGCAATTGAGAGATTTGGAGAGATATATACGAGAGTGGAAGCAAAGAAACAAAGGCAAATGTTGGAGTTAGAGAAACAAAGGATGCAATTTGCTATAGATTTGGAGTACCAAAGGTTGCAGCTCTTTATGGAAACACAAGTTCAGCTCCACAAAATCAACCGTTCTAAGCATTCTTCTGCACCTAGTGAGGCTTTGTGA 828 0.5048 MTIDSLAEALPSACWSETATFTLIDAWGKRYLHLNRGNLRQKQWQEIAGTVNRRHGHRRTEVQCKNRLDTLKKKFKIEKARVSEFNGGGYDGAWPFFHRLNFLIGDNYPSHRPSPAVRRHREIRPPAKFPEWALPPAGRRSDTQKRQSALLNSYFSRNLSAFAAAAAVVAKEEEGENLNRWKLRNESEKRKRVKESDNEDCETVCKKVALAIERFGEIYTRVEAKKQRQMLELEKQRMQFAIDLEYQRLQLFMETQVQLHKINRSKHSSAPSEAL* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0406 275 Pfam Myb/SANT-like DNA-binding domain 13 102 IPR044822 -
Lan18g0406 275 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 270 IPR044823 -
Lan18g0406 275 Gene3D - 15 77 - -
Lan18g0406 275 Coils Coil 171 191 - -
Lan18g0406 275 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 13 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0406 Lan-Chr18 7713499 7722709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0406 134 262 Trihelix Transcription Factor Family AT3G14180 30.000 2.86e-12 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan18g0406 Myb_DNA-bind_4 8e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0406 - - gmx:100811154 283.493