Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0392 ATGCATATAGAGGAATTGAAGGGAGTGGAGGTGGTGGAGGAAGGTGGAGAGGGGGGAAAAGTCTCAAGTGTTGTTGTTTCTGATGCGAAAAGGGTTCTGGTTGGAGCAGGGGCTCGTGCTCTTTTTTATCCAACCTTGCTTTACAATGTTGTTAGGAATAAGATTCAGGCCGAGTTTCGATGGTGGGATAAGGTTGATGAGTTCGTATTACTAGGTGCTGTTCCATTCCCCATTCATGTTCCCCGGTTGAAGGAACTTGGTGTTTGTGGGGTCATTACACTGAATGAGCCATACGAGACTTTGGTTCCAACCACATTATATTACGCTCGTGGTATTGACCATTTGGTGATTCCTACTAGAGATTATTGTTTTGCCCCATCATTGTGCGACATATGCCAAGCTGTGAACTTCATACATGAAAATGCTTTGTCTGGACGCACTACATATGTTCACTGCAAAGCTGGACGGGGTCGCAGTACAACTATCGTTATCTGTTATCTGGTTCACCACAAACTGATGACGCCTGATGCTGCATATGCATATGTGAAGTCAATTCGGCCTAGGGTGCTTCTGGCTTCTTCCCAGTGGCAGGCTGTTCAGGAATACTATTGCCACCTTATGGTGAGGGGGGCTGTTGGATGTGCTCCTGCAGGCAATCTATCAGTAAAGCCTTATGAGGCAGCAGCAGCAGCTTCGCGAGATCATGTAATGTTCGATGATAGTTCTGTAGTTGTGGTAACGGAATCAGATCTTGAAGGATATGATCCAAGTATTCACTCAGGAACTATGACAAGTGAAATATGGACAGATTTGAGTGTTGTTTACCGAACACGAGTTGTTGGACAGGCAGCATTGGCAAGAATCTCATGCCTTTGGCTGCGATACAGTACTAACCAGAAGATATCGTCGGAGAAATTGAGCAGGGAGAGCAGCTGCACGATCAGAACTGATCACTCAGGAGGAATTAGTGTGGATATCCATGTGTACTGA 990 0.4576 MHIEELKGVEVVEEGGEGGKVSSVVVSDAKRVLVGAGARALFYPTLLYNVVRNKIQAEFRWWDKVDEFVLLGAVPFPIHVPRLKELGVCGVITLNEPYETLVPTTLYYARGIDHLVIPTRDYCFAPSLCDICQAVNFIHENALSGRTTYVHCKAGRGRSTTIVICYLVHHKLMTPDAAYAYVKSIRPRVLLASSQWQAVQEYYCHLMVRGAVGCAPAGNLSVKPYEAAAAASRDHVMFDDSSVVVVTESDLEGYDPSIHSGTMTSEIWTDLSVVYRTRVVGQAALARISCLWLRYSTNQKISSEKLSRESSCTIRTDHSGGISVDIHVY* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0392 329 ProSitePatterns Tyrosine specific protein phosphatases active site. 150 160 IPR016130 GO:0016311|GO:0016791
Lan18g0392 329 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 129 197 IPR000387 GO:0016311|GO:0016791
Lan18g0392 329 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 206 IPR029021 -
Lan18g0392 329 PANTHER - 1 329 - -
Lan18g0392 329 CDD PTPMT1 61 203 IPR044596 GO:0004721
Lan18g0392 329 Gene3D Protein tyrosine phosphatase superfamily 61 210 IPR029021 -
Lan18g0392 329 Pfam Dual specificity phosphatase, catalytic domain 106 203 IPR000340 GO:0008138|GO:0016311
Lan18g0392 329 ProSiteProfiles Dual specificity protein phosphatase domain profile. 61 208 IPR020422 GO:0006470|GO:0008138
Lan18g0392 329 SMART dsp_5 64 205 IPR020422 GO:0006470|GO:0008138
Lan18g0392 329 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED 1 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0392 Lan-Chr18 7406266 7411110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0392 12 329 Protein tyrosine phosphatase (PTP) family AT2G35680 60.976 2.57e-135 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0392 - - gmx:100790413 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0963 6 9055587 9059345 Lan18g0392 18 7406266 7411110 LSH