Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0391 ATGTCGAACCCAGCTGAAGTTTCTGCTTTGAACCGGATCAAACTTCATCTCCTAGGTGAACTTTCTCCACTTGCAATTTCAGACCAAAACAAACGATGTTTTCAATTTCAAGATCCAAACCCTAACTTCTCTCAATCTCAATCTCAATCTTCTTCAACTTCTGACTCTTCTGTTTCTCTCAATCATTACTTCGGTAATCTACTTGAAAGCGAATTCGATTTTCCCCAATTCGAATTCGAGTCCAAACTCGAAGTAACTGATCTTGAAGTTGCAACCCCGAAAACCCTAATTGAGGAGAAGAAACCTGAACTGAGTCGTAAACCGTCGCTGGTTATTTCAGTGCCGAAGAAAACCGAGTGGATCCGGTTCGTTGAGCCCGAACCGGAACCGGTTCAGAAGGTTGAACCGGAGGAGAGAAAACACTACAGAGGAGTTCGTCAAAGACCATGGGGAAAATTCGCCGCCGAGATCCGGGACCCGAATAAGCGTGGTTCTAGGGTTTGGCTCGGAACTTTCGACACCGCCATAGAAGCTGCAAAAGCTTACGATCGAGCTGCATTTAGGTTTCGTGGCTCAAAAGCGATTCTCAATTTTCCGCTTGAAGTTGGAGTTACGGCGGAGAACGGTGACGGCGAGAGGAAGCGCCGCCGTGAAGAGGCGGAGGAGGAAGTTGAAGAAGTAAAGGTGGTGGTGAAGAAAGAGAAAAAGATGGAAACGGTAACGGAGATGAAAGGTGTTAATGAGCTTCCGTTAACGCCTTCTATTTGGACTGGATTTTGGGAAAGCGATGTTAACAGAGTTTTTAATGTTCCGCCGTTGTCGCCGTTATCTCCCATTCCGGCGGTGGGTTATCCACAATTAATGGTTGTATGA 873 0.4628 MSNPAEVSALNRIKLHLLGELSPLAISDQNKRCFQFQDPNPNFSQSQSQSSSTSDSSVSLNHYFGNLLESEFDFPQFEFESKLEVTDLEVATPKTLIEEKKPELSRKPSLVISVPKKTEWIRFVEPEPEPVQKVEPEERKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFRFRGSKAILNFPLEVGVTAENGDGERKRRREEAEEEVEEVKVVVKKEKKMETVTEMKGVNELPLTPSIWTGFWESDVNRVFNVPPLSPLSPIPAVGYPQLMVV* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0391 290 CDD AP2 140 199 IPR001471 GO:0003700|GO:0006355
Lan18g0391 290 ProSiteProfiles AP2/ERF domain profile. 141 199 IPR001471 GO:0003700|GO:0006355
Lan18g0391 290 SUPERFAMILY DNA-binding domain 141 201 IPR016177 GO:0003677
Lan18g0391 290 PRINTS Ethylene responsive element binding protein signature 142 153 IPR001471 GO:0003700|GO:0006355
Lan18g0391 290 PRINTS Ethylene responsive element binding protein signature 165 181 IPR001471 GO:0003700|GO:0006355
Lan18g0391 290 Gene3D AP2/ERF domain 140 201 IPR036955 GO:0003700|GO:0006355
Lan18g0391 290 Pfam AP2 domain 141 191 IPR001471 GO:0003700|GO:0006355
Lan18g0391 290 Coils Coil 217 237 - -
Lan18g0391 290 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 274 - -
Lan18g0391 290 SMART rav1_2 141 205 IPR001471 GO:0003700|GO:0006355
Lan18g0391 290 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 4 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0391 Lan-Chr18 7392385 7393539 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0391 1 290 AP2-EREBP Transcription Factor Family AT5G47230 46.885 4.74e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan18g0391 AP2 2.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0391 K09286 - gmx:100800453 299.286