Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0388 ATGTACCCACACAATACCTACGAATCAGACTTGGCCCTTTTAGACTCCATACGCCGCCACTTAATAAGTGAATCCGAACCCAAATTCAAGGATCCGAATAACGTTTCGGGTAATAACCCGTTTTTCTCTCTGAGCTCCAGTTTCAGCAGCTTATACCCATGTTTAACTGATAATTGGGGTGAACTTCCACTAAAGGAAGATGATTATGAAGATATGGTTCTCTACAGTGTTCTCCACGACGCTGTTAATGTTGGGTGGATCCCATCTTTCGAAACTGGGTCATCTGAATCAAATGTCTCCGGTCAAATGGTTGTGAAATCGGAGCCGGATGTTATGTCACCGATGACTGCTCCGGAGGTGATTACGAAGGCGGTTCCGGAGAATGGGAAGCATTACCGTGGCGTTCGCCGACGACCATGGGGGAAATTTGCGGCGGAGATTCGAGACCCGGCGAAAAATGGTGCTCGGGTTTGGCTTGGGACGTTTGAAACGGTGGAGGATGCGGCGTTGGCTTATGATCGCGCCGCGTATCGGATTCGAGGGTCCCGGGCGTTGCTGAATTTTCCGCTCCGGGTTAACTCCGGTGAACCCGACCCGGTTAGGGTTACTTCGAAGCGATACTCGTCAGAAAGTGGTTCGAGTTCTTCATCAATGAAGAAACGGAGAAAGATAGTGGCACCTTAA 684 0.4956 MYPHNTYESDLALLDSIRRHLISESEPKFKDPNNVSGNNPFFSLSSSFSSLYPCLTDNWGELPLKEDDYEDMVLYSVLHDAVNVGWIPSFETGSSESNVSGQMVVKSEPDVMSPMTAPEVITKAVPENGKHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTFETVEDAALAYDRAAYRIRGSRALLNFPLRVNSGEPDPVRVTSKRYSSESGSSSSSMKKRRKIVAP* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0388 227 SUPERFAMILY DNA-binding domain 131 191 IPR016177 GO:0003677
Lan18g0388 227 Gene3D AP2/ERF domain 130 192 IPR036955 GO:0003700|GO:0006355
Lan18g0388 227 SMART rav1_2 131 195 IPR001471 GO:0003700|GO:0006355
Lan18g0388 227 CDD AP2 130 189 IPR001471 GO:0003700|GO:0006355
Lan18g0388 227 PANTHER BNAANNG21280D PROTEIN 25 226 - -
Lan18g0388 227 PRINTS Ethylene responsive element binding protein signature 132 143 IPR001471 GO:0003700|GO:0006355
Lan18g0388 227 PRINTS Ethylene responsive element binding protein signature 155 171 IPR001471 GO:0003700|GO:0006355
Lan18g0388 227 MobiDBLite consensus disorder prediction 193 227 - -
Lan18g0388 227 MobiDBLite consensus disorder prediction 204 220 - -
Lan18g0388 227 Pfam AP2 domain 131 181 IPR001471 GO:0003700|GO:0006355
Lan18g0388 227 PANTHER DNA-BINDING DOMAIN 25 226 IPR044808 GO:0003700|GO:0009873
Lan18g0388 227 ProSiteProfiles AP2/ERF domain profile. 131 189 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0388 Lan-Chr18 7337990 7339091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0388 8 226 AP2-EREBP Transcription Factor Family AT4G17500 55.372 2.42e-78 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan18g0388 AP2 2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0388 K09286 - gmx:100817097 279.641