Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0367 ATGGAAGAGAGAAATGATAATGAGAAATATGATGAAGTTATGCTACCAGGGTTTAGGTTTCATCCAACTGATGAGGAGCTTGTTGGGTTTTACCTCAAGAGAAAGATTCAGCAATGGCCTATGTCTATTGAGCTAATCAAGCAGCTTGATATCTATAAATATGACCCATGGGATCTTCCAAAGTTGGCCTCAAATGGAGAGAAAGAGTGGTATTTCTACTGTCCCAGAGATAGGAAATACAGGAACAGTGCAAGACCTAATAGGGTAACAGGAGCTGGATTTTGGAAAGCTACAGGGACAGACAGACCTATATACTCTTCAGAGGGTTCTAAGTGTATTGGCCTCAAAAAATCTCTTGTGTTCTATAAAGGTAGAGCTGCCAAAGGGGTCAAAACTGATTGGATGATGCATGAGTTCAGGCTACCTTCTCTCACAGACTCATCATATCCCCCAAAGAAGTATATAGACAAGACCATTGCTGCAAATGAATCCTGGGCAATCTGCAGGATATTCAAGAAAACCAATGCTACAGCTCAAAGAGCTCTCTCTCACTCTTGGGTCTCTCCCTTACGTGAAACAATGAACTCTGATATGCTAACCAATGATCCAAACAGCACCCATTTTTGCTCAATAACCATGCCATTGACAAAGCAAACTAGCTTTTCCAGCCACTTTTCTAACATTAATCACAGTGACACACATCACTTAACCACTTCTAGTAGCACTTTCAGTCCTTTAGATTTTGCATCTTATAACAAATCCATTATTAGTCCATTGCTTCAAAGACCCTTCGATCAATTACCCATTTCAAATGGAGACCTTAGCAATGGCTTAATGTTCTCAACTCCTCTTGAAACATCTACAACAAGTTCTAAATCTACAATGGATGTTTCTTCCTTGCTGTTTAATATGTCATCTTCTGTGCCAGGAGATTTTAGCTTAACTTCTGAGGGAATAACTACAAACTTTGGTTTGTTGCAAGAGAATAATAATGGCTACCCAATATCATTACTACGTGAGATGCAAGGGACCATTGACAACCAAAACAACAACGTATTAGTGAAAATTCCTAATATAAATGTGCCTCATGTTGATGAGCAAGAGTTGGAGAAAGTAAGATCCATTGGATTTCCACACAGTATGCCTAATTTCAATGTTGGTGATGCATGGAAGTCAAATCTGCTTTGGGATTCTTCTTCTTGTCCTTGTGATCATGTATCATCTAGTTATTCCACTACTAAGTGTTATACTTAG 1254 0.39 MEERNDNEKYDEVMLPGFRFHPTDEELVGFYLKRKIQQWPMSIELIKQLDIYKYDPWDLPKLASNGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLTDSSYPPKKYIDKTIAANESWAICRIFKKTNATAQRALSHSWVSPLRETMNSDMLTNDPNSTHFCSITMPLTKQTSFSSHFSNINHSDTHHLTTSSSTFSPLDFASYNKSIISPLLQRPFDQLPISNGDLSNGLMFSTPLETSTTSSKSTMDVSSLLFNMSSSVPGDFSLTSEGITTNFGLLQENNNGYPISLLREMQGTIDNQNNNVLVKIPNINVPHVDEQELEKVRSIGFPHSMPNFNVGDAWKSNLLWDSSSCPCDHVSSSYSTTKCYT* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0367 417 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Lan18g0367 417 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 415 - -
Lan18g0367 417 SUPERFAMILY NAC domain 13 173 IPR036093 GO:0003677|GO:0006355
Lan18g0367 417 PANTHER PROTEIN FEZ ISOFORM X1 1 415 - -
Lan18g0367 417 Gene3D NAC domain 23 178 IPR036093 GO:0003677|GO:0006355
Lan18g0367 417 ProSiteProfiles NAC domain profile. 14 173 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0367 Lan-Chr18 6916267 6918471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0367 1 253 NAC Transcription Factor Family AT1G26870 67.050 9.76e-114 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan18g0367 NAM 2.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0367 - - vun:114179488 571.622