Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0359 ATGAATAAGATCAGCAACTTGAGCTGTGTTAGCAGCTCTAATCTCATAGATGCAAAGCTTGAAGAGCATCAGTTGTGTGGATCCAAACAGTGCCCAGGTTGTGGACACAAGTTTCAAGGAAAGCGGGATTGGCTAGGTCTACCAGCAGGAGTCAAGTTTGATCCAACAGACCAAGAACTCATAGAACATCTTGAATCCAAAGTAGAAGCAAAATACTTGAAATCACACCCCTCGATAGATGGGTTCATTCATACTATTGAAGGAGAAGATGGGATTTGTTATACCCACCCTGAGAGACTTCCAGGTGTAACAAGAGATGGGTTAAGCAGACACTTTTTCCATAGACCATCAAAAGCATATACAACAGGGACAAGAAAGAGAAGAAAGATTCAAAATGAATATGAAAACTTGCCAGGAGGAGAAACAAGGTGGCACAAAACTGGTAAAACAAGGCCAGTAATGGTTAATGGAAAACAGAAGGGGTGCAAGAAAATTCTAGTCCTCTATACAAATTTTGGTAAGAATAAGAAACCTGAGAAGACAAATTGGGTTATGCACCAATACCATTTGGGAATGCATGAAGAAGAGAAAGAAGGAGAGCTTGTTGTGTCGAAAATATTCTATCAGACACAACCAAGGCAATGCAATTGGTCTGATAAAATTAATGCAACAACAATAGTTACTGCTGAATTAGTATGTGGAGAACAACGTAATTGTAACAATGGTGGAAGAGACAATGGAAGTAGTTCTTCTTCTAAGGAAATAGTTACCTATAGAGATGAGATATTTGACGTTGTTGGTGTTCCTCCATTGACAAGCTTCAACAATGCTTTTGATATTCAACAGCTAAACTCTGAGCATTTCAGCTTCATGCAATTCAGAAATGGATGGGGATCACCTGTTCCAAAATGGTGTCCCCAATCCTGTTCCACACCATTCATGTTTAAACACATGGATTTAATTTTTTTTTTTTAA 975 0.3867 MNKISNLSCVSSSNLIDAKLEEHQLCGSKQCPGCGHKFQGKRDWLGLPAGVKFDPTDQELIEHLESKVEAKYLKSHPSIDGFIHTIEGEDGICYTHPERLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNEYENLPGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNKKPEKTNWVMHQYHLGMHEEEKEGELVVSKIFYQTQPRQCNWSDKINATTIVTAELVCGEQRNCNNGGRDNGSSSSSKEIVTYRDEIFDVVGVPPLTSFNNAFDIQQLNSEHFSFMQFRNGWGSPVPKWCPQSCSTPFMFKHMDLIFFF* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0359 324 Gene3D NAC domain 56 213 IPR036093 GO:0003677|GO:0006355
Lan18g0359 324 SUPERFAMILY NAC domain 42 209 IPR036093 GO:0003677|GO:0006355
Lan18g0359 324 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 299 IPR044799 GO:0003700
Lan18g0359 324 Pfam No apical meristem (NAM) protein 48 190 IPR003441 GO:0003677|GO:0006355
Lan18g0359 324 ProSiteProfiles NAC domain profile. 47 209 IPR003441 GO:0003677|GO:0006355
Lan18g0359 324 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 3 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0359 Lan-Chr18 6656692 6664599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0359 11 227 NAC Transcription Factor Family AT5G56620 71.552 2.06e-114 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan18g0359 NAM 4.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0359 - - lang:109332503 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0359 18 6656692 6664599 Lan6g1991 6 30766422 30772589 LSH
Lan18g0359 18 6656692 6664599 Lan6g1991 6 30766422 30772589 PCT