Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0351 ATGTTAAATTTGCATTCCATCATCTCTGTTTTACTACTTATTCTCCTTCTCCAAAAACCCATTTCAATACAATGCCACACCATGGGATTTAGACCTGGGCGCTCATCAGGGAATGGACTAACCATAAACATGACCAGAGTCCAATTTTCAGAACAACAATTCATGAAATGGGTGGAGTTTGTAGGTGGTCTCAAACACACTGTCTTTGGGTCAGCCAAAAATAAGCTTTTTCCTTCATTCACTTTGAAAGTTTCTAAGAATCCATCTAAAGGAGATTTTTCTTCAATTCAAGCAGCCATTGATTCCTTACCCTTCATCAATTTAGTGAGAGTGGTTATTAAGGTCCATAAAGGGGTATACAAGGAGAAAGTTAACATTCCTCCATTGAAATCCTTCATAACCATACAAGGATCTGGTGCAGATAAAACCATTGTTCAATGGGGTGACACTGCTCAAACACCAGGGCCAAAAGGCCAGCCACTAGGAACTTATGGTTCTGCAACTTTTGCAGTGAATTCACCTTATTTCATTGCAAAGAACATAACATTCAAAAACACCACCCCAATTCCTGATCCGGGAGCAGTGGGAAAACAAGCAGTGGCATTAAGAATTTCAGCAGATACAGCAGTATTCCAAGGCTGCAAATTCTTAGGAGCACAAGACACGCTCTATGATCATATTGGTAGGCATTACTACAAAGATTGTTATATTGAAGGCTCTGTTGATTTCATATTTGGCAATGCTCTTTCTCTATTCGAGGGATGTCACGTGCATGCGATAGCACAAAATATAGGGGCACTAACAGCCCAAGGAAGGGGTAGTTTATTAGAGGACACGGGTTTCTCATTTGTGCACTGTAAGGTCACGGGATCAGGAGCACTATACCTTGGAAGAGCTTGGGGACCCTTTTCTCGTGTTGTTTTTGCCTACACTTATATGGACAATATCATCATTCCCAGAGGGTGGTATAACTGGGGTGACCCTAATCGTGAAGTGACTGTATTCTATGGACAGTATAAATGCACAGGACCAGGAGCAGGGTTTGCAGGGAGAGTATCATGGTCAAAGGAGCTCACTGATGAGGAAGCTAAACCATTTATTTCAATTAACTATATTGATGGTTCGGAATGGATTAGGGATATTTTTTGA 1149 0.4108 MLNLHSIISVLLLILLLQKPISIQCHTMGFRPGRSSGNGLTINMTRVQFSEQQFMKWVEFVGGLKHTVFGSAKNKLFPSFTLKVSKNPSKGDFSSIQAAIDSLPFINLVRVVIKVHKGVYKEKVNIPPLKSFITIQGSGADKTIVQWGDTAQTPGPKGQPLGTYGSATFAVNSPYFIAKNITFKNTTPIPDPGAVGKQAVALRISADTAVFQGCKFLGAQDTLYDHIGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQNIGALTAQGRGSLLEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPRGWYNWGDPNREVTVFYGQYKCTGPGAGFAGRVSWSKELTDEEAKPFISINYIDGSEWIRDIF* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0351 382 ProSitePatterns Pectinesterase signature 2. 237 246 IPR033131 -
Lan18g0351 382 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 4 379 - -
Lan18g0351 382 PANTHER PECTINESTERASE 4 379 - -
Lan18g0351 382 SUPERFAMILY Pectin lyase-like 78 378 IPR011050 -
Lan18g0351 382 Pfam Pectinesterase 89 374 IPR000070 GO:0030599|GO:0042545
Lan18g0351 382 Gene3D - 79 381 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0351 Lan-Chr18 6503189 6510320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0351 1 378 Carbohydrate Esterase AT5G47500 42.216 1.44e-100 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0351 K01051 - jre:109018691 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0351 18 6503189 6510320 Lan6g1147 6 11561185 11566403 LSH