Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0345 ATGTCTATGGCTCGTTTGGATTTAGGAACTGCTTCACGCTTTGTTCAAAACCTTCACAGACCAGACTTGCACCTTCAGCAACATCACCACCAAGATTCCGAAGAACAAGAAGATCACAATCATCACCGACAACATCGTGGTGCAGGTGCAAGTGCTTTTTCCACCGAAGAAGATGATCAGAGCCAAGGTCTTGAGATGGGGTCGGCTTCAGGCGGCGGTCCTGGCGATGTCATTGGTCGCCGCCCACGAGGCCGACCCCCTGGCTCCAAGAACAAGGCAAAGCCTCCGGTGATAATCACAAGAGAAAGTGCCAACACACTGAGGGCACATATTCTGGAGGTAGGTAGCGGGGCAGATGTATTTGACTGCGTTGCTACCTACGCACGCCGACGCCAGCGGGGGATTTGCATCCTCAGCGGCAATGGCACTGTCACTAATGTGACCCTCAGGCAGCCATCGGCTGCAGGAGCCGTGATCACACTCCAAGGAAGATTTGAGATATTGTCCCTCTCGGGATCCTTTTTGCCGCCTCCAGCTCCCCCTGGTGCTACCAGCCTCACCATCTACCTTGCTGGAGGGCAAGGGCAGGTGGTGGGAGGTAGTGTTGTGGGAGAATTGATGGCGGCAGGACCGGTCATAGTCATTGCTTCCTCGTTTACCAACGTGGCTTATGAGAGGTTGCCGTTGGAAGAAGATGAGCAACAGCTTCAGATGCAGCCACCTGTTTCTCAGGGTTCCGGTGGTGGTATTGGGAATAATCCGTTTTCGGATCCATCTTCTGGTTTTCCTTTCTTCAATTTACCGTTGAATATGCAGAATGTTCAGATGCCTGTGGATGGTTGGGCTAGAAACTCAGGTCCACGTCCTCCATTTTGA 876 0.5274 MSMARLDLGTASRFVQNLHRPDLHLQQHHHQDSEEQEDHNHHRQHRGAGASAFSTEEDDQSQGLEMGSASGGGPGDVIGRRPRGRPPGSKNKAKPPVIITRESANTLRAHILEVGSGADVFDCVATYARRRQRGICILSGNGTVTNVTLRQPSAAGAVITLQGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGSVVGELMAAGPVIVIASSFTNVAYERLPLEEDEQQLQMQPPVSQGSGGGIGNNPFSDPSSGFPFFNLPLNMQNVQMPVDGWARNSGPRPPF* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0345 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 108 221 IPR005175 -
Lan18g0345 291 MobiDBLite consensus disorder prediction 236 255 - -
Lan18g0345 291 MobiDBLite consensus disorder prediction 233 255 - -
Lan18g0345 291 ProSiteProfiles PPC domain profile profile. 104 240 IPR005175 -
Lan18g0345 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 3 291 - -
Lan18g0345 291 MobiDBLite consensus disorder prediction 26 97 - -
Lan18g0345 291 MobiDBLite consensus disorder prediction 26 45 - -
Lan18g0345 291 CDD DUF296 108 191 IPR005175 -
Lan18g0345 291 Gene3D - 107 240 - -
Lan18g0345 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 104 236 - -
Lan18g0345 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 291 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0345 Lan-Chr18 6285686 6287127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0345 3 291 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 65.924 6.29e-104 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0345 - - jre:108994023 375.941