Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0338 ATGGGTTGCTTTTTCTCCAAAAATGCTACTCTTCGCTCTCGTGAAGACCCTCCAATTTCCTTACATGGTTCTAAGACACCTGATCCAGGTAATGGGGATAGTGTTGTTGAACAAGACAATAAGGTTCCAGCTTTCAAAGAGTACAGTCTGGATGAACTGAGAAGGGCCACAAATGAGTTCAGCAGAAGTAACATTGTCTCTGAGAGTGGCGAGAAAGCTCCCAATGTGGTTTACAAAGGGAAGCTCGAGAACAACCAGTTAGTTGCCGTCAAACGGTTCTCGAAACTGTCTTGGCCTGATGTTCAACAGTTCATGGCAGAGGCAGCTGGAGTTGGGAAAGTGAGGCACAAGAGAATGGTGAACCTGATCGGATGTTGTGCCGAAGGAGATGAACGGCTCTTGGTAGCTGAATACATGCCAAATGACACTTTATCCAAGCATCTCTTTCATTGGGAGAAGCAACCGTTACCATGGGAAATGCGTGTTAGAGTTGGATACCATGTTGCTGAGGCACTCAGTCACTGTAGCATGCTAAACCGGAAATTATATCATGATCTGAATGCATATAGGGTCCTTTTTGATGAGGATGGTGATCCCCGTTTATCAAGTTTTGGGCTGATGAAAAATAGTCGAGATGGAAAAAGTTACAGTACTAATTTGGCATATACTCCACCTGAATTTTTGCGAACAGGCAGGATAATCCCAGAGAGTGTTATCTTCAGTTATGGAACTGTTCTTTTGGATCTTTTGAGCGGCAAGCATATTCCTCCAAGCCATGCTCTGGACCTAATTAGAGGGAAGAATGTGTTGTTGTTGTTGGATTCGTCCCTAGAAGGGCAATATGCAAATGATGATGCTACAAAGTTAATTGATCTTGCTTCAAAATGTCTCCAGTTCGAGGCTAGGGACCGACCTGATTTCAAGTTTCTTCTTTCTGAAGTTGCACCTCTTCAAAAGCAGAAAGAGGTAGCATCTAAGGTCTTAATGGGCCTTACTAAAAATACAAATGTGCTACCAACCATGCTTTCTCCTCTCGGAAAGGCTTGTGCAAGGATGGATCTTACTGCAGTGCATGATATATTGTTGAAAACGGGTTATAAAGATGAAGAAGGTGCAGAAAATGAGCTTTCATTCCAAGAGTGGACACAACAAGTGCAAGACATTTTGAACACAAAGAAGTTTGGTGATATTGCTTTTAGAGACAAGGAATTCAAAGATGCTATTGAATATTATTCTAAGTTGGTGGTTATGATGTCTGTTCCTTCTGCTACCGTCTTTGCAAGGAGAGCCTTCTCCTACTTGGTGACTGATCAGGCCGAGCTTGCGTTACGGGACGCCATGCAAGGGCAGGTATGCATACCTGATTGGCCAACTGCATTCTACCTGCAGGCTCTTGCTCTCTCAAAGCTGGGAATGGACACTGATGCACAGGACATGCTTAAAGATGGGGCAGCCTTTGAAGCAAAGAGATCTAACAGCTGGCGCAATTAA 1491 0.4373 MGCFFSKNATLRSREDPPISLHGSKTPDPGNGDSVVEQDNKVPAFKEYSLDELRRATNEFSRSNIVSESGEKAPNVVYKGKLENNQLVAVKRFSKLSWPDVQQFMAEAAGVGKVRHKRMVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWEKQPLPWEMRVRVGYHVAEALSHCSMLNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIFSYGTVLLDLLSGKHIPPSHALDLIRGKNVLLLLDSSLEGQYANDDATKLIDLASKCLQFEARDRPDFKFLLSEVAPLQKQKEVASKVLMGLTKNTNVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKEFKDAIEYYSKLVVMMSVPSATVFARRAFSYLVTDQAELALRDAMQGQVCIPDWPTAFYLQALALSKLGMDTDAQDMLKDGAAFEAKRSNSWRN* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0338 496 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 495 IPR045845 GO:0004672|GO:0009742
Lan18g0338 496 Gene3D Tetratricopeptide repeat domain 386 495 IPR011990 GO:0005515
Lan18g0338 496 Pfam Protein tyrosine and serine/threonine kinase 76 312 IPR001245 GO:0004672|GO:0006468
Lan18g0338 496 ProSiteProfiles Protein kinase domain profile. 63 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0338 496 SUPERFAMILY Protein kinase-like (PK-like) 43 314 IPR011009 -
Lan18g0338 496 Gene3D Transferase(Phosphotransferase) domain 1 140 332 - -
Lan18g0338 496 Gene3D Phosphorylase Kinase; domain 1 34 138 - -
Lan18g0338 496 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK2 1 495 - -
Lan18g0338 496 SUPERFAMILY TPR-like 387 488 IPR011990 GO:0005515
Lan18g0338 496 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0338 Lan-Chr18 6158708 6165357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0338 33 312 Receptor kinase-like Gene Family AT4G23300 32.013 1.16e-38 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lan18g0338 PK_Tyr_Ser-Thr 5.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0338 K14500 - gmx:100793576 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0929 6 8663600 8669908 Lan18g0338 18 6158708 6165357 LSH