Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0327 ATGGAGAGAGATTTCATGGGTCTTAGCTCAAAAGAATCACTTATTATGGTCAAGGAAGAGATCAACGATGACTCAGGCTTCACGAAGAACTCTGCTGCAGAATGGCTCTTCTCCAACAAAGTCTCTGCGGTTCCACATTTGATGTCTTTCAAGGCTTATCAAGATGACAAGATTAAAAAGATGGTCACAAACCAAAGTCCAGGAGCATTTGATTCTAGTAAAAAACACTCTGCTGGTGAACCCCAGAAACCTTTCAACCATGATGGACAAAGTGGCTTTCATTTTTCCCTGACTCAATGTCCTGTACAACATGGTGTGAAGATGTTTTCAGTTTCCAATGAGATAATCACAGGGAACCAATTCCTGAAGAATCATTTTGCATCTTCTGATCAGAATATGAACGCTTTTAATGTGATGCAGCCACTACATGGGGGAATACCTGTCACAGAACCTCATTCAGATTTTCCCACAATTTGTTCTATTGATGCAATGAATGAATCATGTAATGGTGTAAAACCATCTGCATCTTCTGCTCAACTTACTATCTTCTATGAGGGTACTGTGAATGTCTTTAATGATATCTCTGCCGAGAAGGCACAAGCAATCATGCTGTTGGCTGGAAATGGCTTTTCTGCTGCTTTTAACATGTCACAACCAAAAGTTCAGGTACCCAGCTCGAAGTTGACAGCTAGTGATCCAATGCCTATGAGCCAACCTGCAAATACAGCACCCGGCTCTGGTCATTCAAGTCCTTTATCTGTTTCATCGCATACCCGCACACAGTCTGGAAGTGGCTCAAATAGCAACAATGAGATTATGGCAGCTAAAACAAATGTAGCTGCTTCTTCCACTCCTGTCAAAAATGCGGAGCCTCGGAAAGTAGTTGATGCAACTGCTATGTTGACATCAGCTGCACCACAGGCTCGCAAAGCATCTTTGGCTCGATTTTTAGAAAAGCGCAAGGAAAGGGTGATGAATGCAGCACCATATAATCTTAACCTGAAGTCTGAGGAGTGTGCCACTGCTGAATACAATGGTGCTAATTTCCATGCAATTATTACTGCTTCTAATAATCTTTCAGCCAAGTAA 1089 0.4197 MERDFMGLSSKESLIMVKEEINDDSGFTKNSAAEWLFSNKVSAVPHLMSFKAYQDDKIKKMVTNQSPGAFDSSKKHSAGEPQKPFNHDGQSGFHFSLTQCPVQHGVKMFSVSNEIITGNQFLKNHFASSDQNMNAFNVMQPLHGGIPVTEPHSDFPTICSIDAMNESCNGVKPSASSAQLTIFYEGTVNVFNDISAEKAQAIMLLAGNGFSAAFNMSQPKVQVPSSKLTASDPMPMSQPANTAPGSGHSSPLSVSSHTRTQSGSGSNSNNEIMAAKTNVAASSTPVKNAEPRKVVDATAMLTSAAPQARKASLARFLEKRKERVMNAAPYNLNLKSEECATAEYNGANFHAIITASNNLSAK* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0327 362 MobiDBLite consensus disorder prediction 64 90 - -
Lan18g0327 362 MobiDBLite consensus disorder prediction 224 270 - -
Lan18g0327 362 SMART tify_2 173 208 IPR010399 -
Lan18g0327 362 ProSiteProfiles Tify domain profile. 173 208 IPR010399 -
Lan18g0327 362 PANTHER PROTEIN TIFY 7 16 353 - -
Lan18g0327 362 Pfam tify domain 175 207 IPR010399 -
Lan18g0327 362 Pfam Jas motif 306 330 IPR018467 -
Lan18g0327 362 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 353 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0327 Lan-Chr18 5793301 5797065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0327 35 339 Tify Gene Family AT3G17860 35.423 3.90e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lan18g0327 tify 2.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0327 K13464 - gmx:100807043 420.624