Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0318 ATGTTAGGTCTTTTGATTCTGATCAAAGTCAAGATTCCGTTGATTCTGTGCTTGCTCAATTGGCACACCGAATTCCTGCTTTTGGCAGAGGAACTATGGGCAATGAAACTTGGTTTGAAACTTCTACAAGAAAGAGCAAAAGTTGGATCGTTTTGGTGGCCATATATCAGCAATCTCCCTGAAACATACAGTGTGCCTATCTTCTTTCCTGGGGAAGACATAAAGAACTTGCAGTATGCTCCTCTTCTTCACCAGGTAAACAAAAGATGTCGGTTTCTTCTTGACTTTGAGCAAGAGATCAAGCGTGCCTTAGTCAATCTTACACCAGATAAGTATCCTTTTGGTGACCAAGAAGTACATGCATCTTCTCTTGGATGGGCAATGGCAGCAGTTTCATCTCGAGCATTCCGCTTATATGGTAACAAGTGTCCAGATGGAGTCCACATTGAGGTACCCATGATGCTCCCTCTCATTGATATGTGCAACCATAGTTTCAGTCCAAATGCCAGAATTGTTCAGGAACGAGATACTGATAACATGAAGATGCAAGTGAAGGTTGTGGCTGAGAGGGAAATTAAAGAAGATGATCCTTTATTACTTAACTATGGTTGTTTAAGCAATGATTTTTTCCTTCTTGATTATGGATTTGTGGTAGACTCCAACCCCTATGATCATATTGAGCTCAAATATGATATTGCTCTTTTGGATGCTGCAAGCATGGCAGCTGGAGTTTCATCACCAAACTTCTCAGCACCTGTTCCGTGGCAGGAACTGATTTTGTCTCAGCTAAATCTAGCTGGAGAAGCTCCAGATCTTAAGGTAACCCTTGGTGGCCATGAAATAGTAGAGGGACGCTTGTTGGCTGCATTGAGAGTACTCCTTGCAAATAATATGGAAACTGCACAGAACTATGACCTTAACACACTCAAGTCTTTATCAGCCGAACCTCCTCTTGGCGTTGCAAATGAGAAAGCTGTATTTCGCACCCTTGTTGCTCTTTGTGTCATTGCGCTGGAACACTTCCCTACGAAAATAATGGATGATGAATCATTGTTGAAGCAGGGTGTTTCAGGATCAACTGAGTTGGCCATTCAATTCAGAATCCAAAAGAAATCTGTGATTGTAGATGTAATGAGATCTCTCTCGAGGAAACTAAAGCTTCTATCATCCAAGGAAACTGTGACTGATGAAGGCTAA 1197 0.4185 MLGLLILIKVKIPLILCLLNWHTEFLLLAEELWAMKLGLKLLQERAKVGSFWWPYISNLPETYSVPIFFPGEDIKNLQYAPLLHQVNKRCRFLLDFEQEIKRALVNLTPDKYPFGDQEVHASSLGWAMAAVSSRAFRLYGNKCPDGVHIEVPMMLPLIDMCNHSFSPNARIVQERDTDNMKMQVKVVAEREIKEDDPLLLNYGCLSNDFFLLDYGFVVDSNPYDHIELKYDIALLDAASMAAGVSSPNFSAPVPWQELILSQLNLAGEAPDLKVTLGGHEIVEGRLLAALRVLLANNMETAQNYDLNTLKSLSAEPPLGVANEKAVFRTLVALCVIALEHFPTKIMDDESLLKQGVSGSTELAIQFRIQKKSVIVDVMRSLSRKLKLLSSKETVTDEG* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0318 398 SUPERFAMILY SET domain 22 221 IPR046341 -
Lan18g0318 398 CDD SET_LSMT 24 217 - -
Lan18g0318 398 ProSiteProfiles SET domain profile. 88 203 IPR001214 GO:0005515
Lan18g0318 398 Gene3D - 219 393 IPR036464 -
Lan18g0318 398 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 213 392 IPR036464 -
Lan18g0318 398 Pfam SET domain 43 203 IPR001214 GO:0005515
Lan18g0318 398 Pfam Rubisco LSMT substrate-binding 253 373 IPR015353 -
Lan18g0318 398 Gene3D set domain protein methyltransferase, domain 1 10 216 - -
Lan18g0318 398 PANTHER F21J9.27 31 394 - -
Lan18g0318 398 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 31 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0318 Lan-Chr18 5596529 5619487 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan18g0318 SET 1.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0318 - - lang:109349738 621.698